Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00823 ATGTCTGAAAACAACGGCGAAGAGAAATTACTCGCTGTGGCGCGTCACATAGCAAAAACATTAGgccaaacaaacaacaacatgGCCGATGATATTCTTCAAATATTCTCAAATTTTGACGGTAGATTTTCTAAGGAGAAACTTTCTGATGAAGGTGTAGGGAATGATACCGTACGCTGTGCTGCACTTGAACAAACTGTTAATTCTCTTGACCGTCAGATTTCAGATCATCTTTCGTCGGAAAATTCTGTTTGCTGTAACTCCACCGCGTTTCTCTCTACCGTTGACGAGCTTGTTTCTACGATCGAAGATTGGAGTCCTCTCTCCGATGATAAGGTCGTTGGAGCGTGTTTACAACGCGCTGATGATATTCTTCAACAGGCTATGTTTCGTGCGGAGGAAGAGTTTCGGTCACTTATGGAAATCGGTGGTGAGTCGTTTGATGTGACTCGGAACAGCGACGAGTTAACTCAGAACGGTAGTTCGTTGTATGATTCgaatggtgaagaagatgatgaagaagaaattgacgGTGATGAGGATGTGATTCCTGTGGCGAAGGCGGTTGTTGATTATGATGTTGTGATAGATGCGTTACCTCCGGCGACGGTTAACGATCTTCGGGAAATCGCGAAACGGATGATTGCGGCGGGGTTTGGGAAGGAGTGCTCGCATGTTTACGGTGGTTGTAGGAGGGAGTTTTTGGAGGAGAGTTTGTCGAGGTTAGGGTTACAGAAATTGAGCATTTCGGAGGTTCATAAGATGCCATGGCAAGAGCTTGAAGATGAGATTGAGCGATGGATTAAGGCTTCGAATGTGGCTCTCAAAATCCTCTTCCCAAGCGAGCGGCGTCTCTGTAATCGCGTTTTCTCCGGTTTGTCTTCGTCATCGGCTGCAGCTGATCTATCCTTCATGGAAGTCTGTCGTGGAGCAACGATTCAGTTGCTGAATTTCGCCGATGCTGTAGCCATAGGTAGTCGCTCGCCGGAACGGTTGTTTAGAGTGCTTGATGTGTTTGAGACTATGCGTGACCTAATTCCTGAATTCGAATTGCTGTTCTCCGATCAGTATTGCTCGTTTCTTGTTAACGAAGCGATCACGATTTGGAAGAGGTTAGGAGAAGCTATTAGAGGAATTTTCATTGAATTGGAGAATCTGATTAGTCGTGATCCAGTGAAGGCGATTGTTCCCGGTGGAGGTCTTCATCCAATCACTCGATATGTGATGAACTACCTCCGTGCTGTGTGCCGGTCCCACCAAACCCTAGAACTTGTTTTTCAAGACAATGCACTTTCTTTGAAGGATTACCCTAAGCATGATGATAGGTTACAAtcaaattcttcattttctgtTCAAATATCTTGGATTATGGACTTGTTAGAACGAAATTTGGAAGCAAAGTCTAAAATTTACAAAGACCCTGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGATACATTGTTCAGAAGACTAAAGACAGTGAATTAGGAACGCTTTTGGGTGATGATTGGATCAGAAAACACAGTGCCAAAATTCGGCAATGCCATATGAACTATGTAAGAAGCTCGTGGAACAAGTTATTTGGGTTTCTGAAGGTGGAAACAATGGCTGCAAAACCCATGAAGGAGAAACTAAAGATGTTCAATCTGCATTTTGAAGTAATATGTAGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGGATCTCCATCGAAAAGCTCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCGAATTGTTCCAGAGCTTGCTAAGAATAGTGATAAGTATATCAAGTTTGGAATAGAGGACGTTGAAGCTCGGCTCACCACTTTGTTTCAGGGAAGCGGTGGATCAAATGGTGGCCGAAAATGA 1902 0.4211 MSENNGEEKLLAVARHIAKTLGQTNNNMADDILQIFSNFDGRFSKEKLSDEGVGNDTVRCAALEQTVNSLDRQISDHLSSENSVCCNSTAFLSTVDELVSTIEDWSPLSDDKVVGACLQRADDILQQAMFRAEEEFRSLMEIGGESFDVTRNSDELTQNGSSLYDSNGEEDDEEEIDGDEDVIPVAKAVVDYDVVIDALPPATVNDLREIAKRMIAAGFGKECSHVYGGCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKASNVALKILFPSERRLCNRVFSGLSSSSAAADLSFMEVCRGATIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFELLFSDQYCSFLVNEAITIWKRLGEAIRGIFIELENLISRDPVKAIVPGGGLHPITRYVMNYLRAVCRSHQTLELVFQDNALSLKDYPKHDDRLQSNSSFSVQISWIMDLLERNLEAKSKIYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHSAKIRQCHMNYVRSSWNKLFGFLKVETMAAKPMKEKLKMFNLHFEVICRVQSQWFVFDEQLREELRISIEKLLLPAYGSFIGRFRIVPELAKNSDKYIKFGIEDVEARLTTLFQGSGGSNGGRK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00823 633 MobiDBLite consensus disorder prediction 151 165 - -
Tsu03g00823 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 623 IPR004140 GO:0000145|GO:0006887
Tsu03g00823 633 SUPERFAMILY Cullin repeat-like 87 622 IPR016159 -
Tsu03g00823 633 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 31 623 - -
Tsu03g00823 633 Pfam Exo70 exocyst complex subunit 265 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu03g00823 633 MobiDBLite consensus disorder prediction 151 177 - -
Tsu03g00823 633 Gene3D Exocyst complex component Exo70 70 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00823 Tsu-Chr3 7486630 7488974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00823 5 633 EXO70 exocyst subunit family AT5G58430 66.458 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00823 K07195 - gmx:100803694 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00823 03 7486630 7488974 Tsu03g00823 03 7486630 7488974 ECH