Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00821 ATGGGAGCAAGAAGTGAAAGACTAGATCAATTAATTTCACATGGAATGATTAATGATGAGAAATTAGTTTGTCAATATGTTACAGGAAAATCAAACAAGGGTGTGTGGTATGGAGATAATCCTCTCCATGAAACCACATCAATTCTAGCATTACAAATTATTCTTATGTTCAGTCTTAGTAGAATTACTCATTTCTTGTTAAGTCCTTGTCATCAAACTCTTCTTATTGCACAAATTGTGGCTGGTATCATGGTAGGTCCATTATTTTTGGAAACTACAAAATATGAGATGTTATTTCCTACAACAAGCATAATGATACTCTCAACATTTGCAGAATTTGGAatgataatttatttctttagGATGGGGGTGCaaataaattacaaacaaaTTGTGATGATTGAAAAACGTGCAGTAATTATTGGAATATTAGGCCACATGTCTTCTACTATATTTGGCACTATAGTATTAAATCATGTTGAAAAATCATACCATTTAGGATCTGAAAATCATGGTATTCAaggtttaatatattttgcttCATTAACCTCATTTCCAGTTATAAGTAACTTCCTAAGTGAGATGAACATTATAAATTCAGAGATTGGAAGAATGGCATTATCAGCATCTATGATTAGTGATGGATGTATGTGGATATTTTACTTTATCATACTCAGTGGAGCTAGAGCCTTGGagaaaaaatcatatttatatgGTGTACAATTAGGTGTAACATTTATCTATTTtgctgttttattttatttattaaggcCATTAGTTATATGGATTTCGAACCGTCATTCCAAAGAAAAGGCAATGAAGGAAACTCATTTCATCGTTATAATTTGTATACTTTTATTTGTTGGATTGTCCGCACAATTTACAGGACAACCTGCTTTTGTCGTTGcgttttggtttggtttagttttACCTGATGGTCCTCCTTTAGGTCCAATTTTGGCTGAAAAGCTTGATACTATTGGCTCTACTTTGATTGTTCCAGCTTATTGTACTACTAGTGGGTTAAGGACAAGTGTTCCTAAATTAGTAGGAACAAAAACAGTATTTGTGGAGGTTGTCTTAATTTCAGTGTATATAGGGAAGTTTGTTGGAACTTTTTTACCATCACTTTACTTTCACATTGAATTAGGGGATTCTTTAGCTTTGGCTCTAATCATGTGTTGCAAAGGCCTCATGGATCTCTGTTTGTTCAACATATTATTGAACACTAAGACAATAGGTGAACTTCCATTCACCCTAATGGTATATACAATGGTGGCCATAACAGGATTTGCAACTCTAGTTGTTTATTACATATATGACCCTTCAAGAAGATACAAAACATACATTAGAAGATCAATTAAAGACTACAAAAAAGATTTTGATCTCAAAATACTTGTATGCATCCAAGATGAAGATAATGTACATCCATTGATTAACCTTCTACAAGCTACAAATCCTACAAACACTACACCTCTCTCAATCTATGTTCTACATCTTATGGAATTAAAAGGAAGAGCAGCTTCAATCCTTACCAAAAATGAGTATAATTCTAATAAACCATATAGATCAAAATCTTATAAAGAGACATCAACTCAACGCATAAGTAATGtgtttaatcaatttttatttcataatgAAGGAAATGTTGCATTGCAATTTTTTACAGCAATTGCACCATATGCTAGCATGCATGATGATATATGCTACATGGCAATGgatacaaaatcaaatattataattGTGCCATTTCATAAACAATGGTCAATGAATGGACATGTTGAAGTTACCAATAGTTCAATTCGATCGGTTAACCAAAAAGTACTAATCAAGGCGCCTTGTTCAATTGGAGTCTTAATCGATCGAAGCCAGATGAGGGGAAACTTATCAGTTATTCGCGAGAAATCTTTTTGTGAAATTGCTATGATTTTCTTAGGTGGAGCCGATGATCAAGAGGCATTGACTTATGCTATGCGTATCGCAGAACATCCGAACATACGACTCACGGTGATTTGGGTACGGTACAAATTGCAACAAAAAgaatataacataaaaaatccTTACATTGATTTGATGGAACATGTAAGGTATACAAGTAACCTAGTAGACAAGGTATTTTTTAAGGAGGAGGTTGTAGAAGATGGGGCAGGAACAACTAGTGTTATTTGTAGGATGGAAGGTTATTTTACCTTAGTTATAGTTGGTAGACAACATGTAGCAAATTCTCCATGTGTAATGGGCTTGACTGAATGGTGTGAACTTCCTGAGCTTGGGCCTGTTGGGAACCTCTTAGCCACATCAGATTTTACTTTTTCTGTTTTAGTTGTGCAACAACAACCATATAATGATTTTTGGTAT 2358 0.3206 MGARSERLDQLISHGMINDEKLVCQYVTGKSNKGVWYGDNPLHETTSILALQIILMFSLSRITHFLLSPCHQTLLIAQIVAGIMVGPLFLETTKYEMLFPTTSIMILSTFAEFGMIIYFFRMGVQINYKQIVMIEKRAVIIGILGHMSSTIFGTIVLNHVEKSYHLGSENHGIQGLIYFASLTSFPVISNFLSEMNIINSEIGRMALSASMISDGCMWIFYFIILSGARALEKKSYLYGVQLGVTFIYFAVLFYLLRPLVIWISNRHSKEKAMKETHFIVIICILLFVGLSAQFTGQPAFVVAFWFGLVLPDGPPLGPILAEKLDTIGSTLIVPAYCTTSGLRTSVPKLVGTKTVFVEVVLISVYIGKFVGTFLPSLYFHIELGDSLALALIMCCKGLMDLCLFNILLNTKTIGELPFTLMVYTMVAITGFATLVVYYIYDPSRRYKTYIRRSIKDYKKDFDLKILVCIQDEDNVHPLINLLQATNPTNTTPLSIYVLHLMELKGRAASILTKNEYNSNKPYRSKSYKETSTQRISNVFNQFLFHNEGNVALQFFTAIAPYASMHDDICYMAMDTKSNIIIVPFHKQWSMNGHVEVTNSSIRSVNQKVLIKAPCSIGVLIDRSQMRGNLSVIREKSFCEIAMIFLGGADDQEALTYAMRIAEHPNIRLTVIWVRYKLQQKEYNIKNPYIDLMEHVRYTSNLVDKVFFKEEVVEDGAGTTSVICRMEGYFTLVIVGRQHVANSPCVMGLTEWCELPELGPVGNLLATSDFTFSVLVVQQQPYNDFWY 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00821 786 Pfam Sodium/hydrogen exchanger family 54 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu03g00821 786 Gene3D - 47 448 IPR038770 -
Tsu03g00821 786 PANTHER CATION/H + ANTIPORTER 35 780 - -
Tsu03g00821 786 PANTHER CATION/H(+) ANTIPORTER 14 35 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00821 Tsu-Chr3 7467486 7471141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00821 14 779 Antiporter Super Family AT1G06970 35.842 2.76e-166 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00821 - - gmx:100787550 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00821 03 7467486 7471141 Tsu03g00821 03 7467486 7471141 ECH