Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00820 ATGGAGTCTGACCCAAACGATCTCATTAGCAACAATTCTATGTCTGATGGAACAGATACACAGTTTGGAGGATCATTCATATGTCATACAATtaatcaaatcaattcaaagggATTTTGGTTAGGAGAAAACCCACTTGCTTTTTCTGTCCCTCTTTTCTTGATCCAGCTTTTTCTTATGTTCGTTTTCACACGCTTCAGTTTCTTTATTCTCAAGCCTTTTGGTCAACTTTCTTTTGTTTCTCAGATTCTTGGTGGTGTGACACTAGGTCCTTCAATTCTTGGTCGCAGCTCATCATTTGCCAACAATTTTTTCCCAATAACAGGACGGAATGTGCTCGACACATTAGCATTTTTTGGTTATATGTTATTCATCTTCATACTTGGAGTAAAGGTAGATCCAACCGTCATTTATCGATCAGGTAAAAGGACGTTCGCCGTTGGAATTTTAAGCTTCTTTGTTCCTTACACTCTCGGCGGAATTGTAGCTTTAATCCTCAGCCACTTTGCATCATTGGATAAGGATGTTTTGACAGTACTTCCTATTGTGGTAGAAGTTCAATGTATCACAGCCTTTCCAGTAATTTCTTGCTTTCTTGCTGAACTTCAGATCCTCAATTCAGAGATTGGACGGTTGGCTTCGTCTTCTTCGCTAGTATGCGACGTTTGCTTCGGTATAGTTTCAACAATGAAGTTTGCTGCAAATCTATCATCAACAAAGTCAATAGGAGTAACCATTGGATCGCTCTTTTCAACCGCTGgtctttttttattcatattttttgttgttcatcCAGCTGCATTATATGCTATTCATCACACACCAGAGGGAAAACCTGTTCAAGAAATTTACATTTGTGGAACTCTTCTAACACTAATGTTTTGTGGCTTCCTCGGCGAAGTTATCGGTATAGATGCAATCGTTATATCATTTATGGTAGGGTTGGCTATACCAGATGGTCCTCCATTAGGTGCAGCATTAGTAGATAAGCTTGAGTGTTTTGTCTCGGTTGTGCTTTTACCATTACTTTTTGCGATCGTTGGATTGAGGATGGAtgtttttgctatacagaagatgaagaatttgtgGATAATTCAGTTGCTTATTGGCATTGCATTTTTTGGTAAGATTATTGGGGCTTTGTTGCCTCTACTTTTCTGTAGGATGCCATTTAGAGATGCTCTTTCTCTTGGTATTATAATGAACTGCAAAGGCACTGTTGAATTGATCTTGTTGATTAATTTGAGATTAAGAAATGTTCTGAATGATGAACTGTTTGCAATTATGATTCTTACTTTAGTGCTTGTAACCGGCATTGTATCACCTGTTGTGAAAGCTCTATATGATCCTTCTAGAAGGTTCCTTGCTTACAAAAGGAGGACAATATTGCATCACCAAAGCGAAGATGAATTGCGCATACTAGCTTGCATTCACAAACAAGATAATGTGTTGGCTATTTTAAACCTACTTTCTGCTTCGAATCCAACCGAAAAAAACCGCATCGATTTAGTTGTACTACAACTTGTTAAGCTTGTGGGAAGAGCTTCATCCGTGCTTGTTGCGCATATACCGCGTGAAAAGCCAAGCGATAGAATCTTCAACGCATTCAGCAAATTTGAAGCTGCTTATAGGGGAAAGGTATCACTACATTGCTACAAAGGTATCTCACCCTATGCTACAATGCACAATGATGTTTGCTACTTAGCACTTGAAAAAAGAATAACTTTCATAATCATACCTTTCCATAAACAATGGATAATCGGAGGTATGGCCGAGTCCTCTTTCGCATTCAAGCAACTCAACAAAAAAGTTCTCGAGAAAGCTCCTTGCTCGGTCGGTGTCCTCATCGATCGTGGCAACCAAAAGAAATTTTGGTGCGGCTATATGAACGAATCGACATATCTAGTAGCCGTGTTTTTCTTCGGAGGTGCAGACGATAGAGAAGTGCTCGGATACGCGAAACGTATGTTGGATCAACCTAATGTAAATATTACTCTCTTTCAATTTACGTCTTCGAAAGATATTGTTGGTGGTTCAGATAGAAGCAAACAACTTGATATTGAAATATTGAGTGACTTTAGACTAAGTGCTTTTAGGAATGATAGAGTTTCTTATAAAGAAGAAGTTGTAATGAATGGAAGAGATGTTCTTAGAGTTATTGAAGAAATGGAAAGTTTTTATGATCTTGTTATGGTTGGAAGAAGGCATGAAGATTCACAATTGATGGCTGAACTTACAAAATGGAAGCATGGAGAGTTGGGAAGTGTAGGAGAGATTCTTGCATCTTTGAATATTGGAGCTCAAACTTCAATTTTGGTTGTGCAACAACAAACTAGATTTTGGGGGTCACGTGATCCAGAGGAGTCTACACATATTAAAAGAGTAAATCTATAG 2394 0.373 MESDPNDLISNNSMSDGTDTQFGGSFICHTINQINSKGFWLGENPLAFSVPLFLIQLFLMFVFTRFSFFILKPFGQLSFVSQILGGVTLGPSILGRSSSFANNFFPITGRNVLDTLAFFGYMLFIFILGVKVDPTVIYRSGKRTFAVGILSFFVPYTLGGIVALILSHFASLDKDVLTVLPIVVEVQCITAFPVISCFLAELQILNSEIGRLASSSSLVCDVCFGIVSTMKFAANLSSTKSIGVTIGSLFSTAGLFLFIFFVVHPAALYAIHHTPEGKPVQEIYICGTLLTLMFCGFLGEVIGIDAIVISFMVGLAIPDGPPLGAALVDKLECFVSVVLLPLLFAIVGLRMDVFAIQKMKNLWIIQLLIGIAFFGKIIGALLPLLFCRMPFRDALSLGIIMNCKGTVELILLINLRLRNVLNDELFAIMILTLVLVTGIVSPVVKALYDPSRRFLAYKRRTILHHQSEDELRILACIHKQDNVLAILNLLSASNPTEKNRIDLVVLQLVKLVGRASSVLVAHIPREKPSDRIFNAFSKFEAAYRGKVSLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESSFAFKQLNKKVLEKAPCSVGVLIDRGNQKKFWCGYMNESTYLVAVFFFGGADDREVLGYAKRMLDQPNVNITLFQFTSSKDIVGGSDRSKQLDIEILSDFRLSAFRNDRVSYKEEVVMNGRDVLRVIEEMESFYDLVMVGRRHEDSQLMAELTKWKHGELGSVGEILASLNIGAQTSILVVQQQTRFWGSRDPEESTHIKRVNL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00820 797 Pfam Sodium/hydrogen exchanger family 61 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu03g00820 797 PANTHER CATION/H + ANTIPORTER 20 782 - -
Tsu03g00820 797 Gene3D - 52 454 IPR038770 -
Tsu03g00820 797 PANTHER OS08G0117800 PROTEIN 20 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00820 Tsu-Chr3 7462601 7466159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00820 14 791 Antiporter Super Family AT2G13620 39.409 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00820 - - gmx:102665255 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00820 03 7462601 7466159 Tsu03g00820 03 7462601 7466159 ECH
Tsu03g00820 03 7462601 7466159 Tsu05g02957 05 39844450 39847991 PCT