Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00812 ATGGCTTATGAGAAAGATACCCTAAACCTTAAAATGAAAGATGTTGAGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATTCTTTCACTTTCTACACTTGACAATACAGGCATCTATAATAACCATTGTGAAACTGTTCATGTATATCGATCATCAACAACTCATCATGATTCTGATTCTTGTTTCAACCTTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTATTATCCTTTTGCAGGTAGACTAGTGAAACATGCCGATGATGGAGTCCATTGCAACCCTAATGAAGAAAACTATGGTGTTCCGTTCTTGGAAGCGACCGCTAATTGCACCCTTTCATCTATTAATTATTTGGACAATACTGACACAGAAATTGCAAAGCATTTGGTGCTTAATCCTCAGGATAAAAGTTATCCGTTGTTGTTCATGGTAACAAAATTTCTTTGTGGGGGTTTCACAATTGGAATGGGGGTGTTGCATGCTGTTTGTGATGGATTTGGTGCATCTCAATTCTTCAGCACAATTGTTGAACTTGCAAGGGGAAGAATTGAACCCTCGGTGATACATATGTGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCACTATTCCCCATGAACAAAGAATCTATTGCATTTTCACCTTTTTTGAATCAAACCAATAGTACAAACATTAAGCAATATTGTTTTAAAGTTGAGGGTGAAATGATAACAAAGCTTAAGTTGAGTTTAATGAAGGAAAGTGAAAATATAAGGGTCACAACATTTGAATCACTTGCAGCTTATATTTGGAGATCTAGAGTAAGAGCCTTAAAACTTAACAACAAGGGAGATACAATGTTGACTGTGATAGTTGGTATGCGACGCAACATGAAGGGTTATGATCCAATACCAAAAGGGTTTTACGaTCTCAATGAAATGTCACTCTTTGAAATTGTTAAGTTGATCAAAGAGGCTAAAAATGTTGCTTCAACTGCCGATTATGTCAAAAACACAATCGACTCTTTGGAGACGAATTTTAAGGACCGTGTTAACATGGAAAAAAGTACCGGCGCACTAACGATTTTGACAGAGTGGAAGCATTTAGGTTTTATGGGTGAAAATGTAGATTTTGGAGGGAAAGAAATAGTACATTTAGTACCAGCACCAAGCAACTTCTTTGGAATTGTGGAAATGTGTATTTTCTCATCTTCTAATAAATTTGATGATGTTGTTCCATCAATGAAAGGAGGAATTAATCTTTTCACATCACTACCCGTTGCTGCCATGCCTAAGTTCAAGGAAGAAATTGAAGCTTTAAGATCTCTTGTTGAAGTTTGA 1347 0.3623 MAYEKDTLNLKMKDVELVKPSKSTPSCILSLSTLDNTGIYNNHCETVHVYRSSTTHHDSDSCFNLCHVFKEALSKALFYYYPFAGRLVKHADDGVHCNPNEENYGVPFLEATANCTLSSINYLDNTDTEIAKHLVLNPQDKSYPLLFMVTKFLCGGFTIGMGVLHAVCDGFGASQFFSTIVELARGRIEPSVIHMWERERLVGSITKQPFPLFPMNKESIAFSPFLNQTNSTNIKQYCFKVEGEMITKLKLSLMKESENIRVTTFESLAAYIWRSRVRALKLNNKGDTMLTVIVGMRRNMKGYDPIPKGFYDLNEMSLFEIVKLIKEAKNVASTADYVKNTIDSLETNFKDRVNMEKSTGALTILTEWKHLGFMGENVDFGGKEIVHLVPAPSNFFGIVEMCIFSSSNKFDDVVPSMKGGINLFTSLPVAAMPKFKEEIEALRSLVEV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00812 448 Pfam Transferase family 11 441 - -
Tsu03g00812 448 PANTHER ACYL TRANSFERASE 4 6 443 - -
Tsu03g00812 448 Gene3D - 5 211 IPR023213 -
Tsu03g00812 448 Gene3D - 226 439 IPR023213 -
Tsu03g00812 448 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00812 Tsu-Chr3 7397420 7403034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00812 8 311 Monolignol Biosynthesis Gene Families AT5G48930 28.972 1.27e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00812 K20240 - gmx:100801843 389.808