Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00811 ATGGCTTATCAAAAGGCTACACTAGACCTTAAAATGAAAGATGTTGAGCTTGTAAAACCATCAAAATTCACTCCTTTTTGTATTCTTTCACTTTCTACACTTGACAATAGAGGCATCTATAATAACCATGGCGAAATTGTTCATGTATATCGATCATCAACAACTCATCATGATTCTAATTCTAGTTCCAACCTTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTATTATCCTTTTGCAGGTAGAGTATTGAAACATGCTGATGATGGAAAACTTAGAGTTCATTGCAACCCTAATGCAGAAAACTATGGTGTTCCATTCTTGGAAGCGACCGCTAATTGCACCCTTTCTTCTATTAATTATTTGGACAATACTGACACAGAAATTGCAAAGCATTTGGTGCTTAGTCCTCAAGATAAAAGTTATCCGTTGTTGTTTATGGTGACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGAATATCACATGCACTTTGTGATGGATTTGGTGTATCTCAATTCTTCAAAGCAATTGTTGAACTTGCAAATGGAAAAAGTGAGCCATCAGTGACACCTGTGTGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCACTATTCCCTTTGAATAAAGAATCTATTGCATTTTCACCTTTTTTGAATCAAACCAGTAGTACAAACATTAAACAATATTGTTTTAAAGTTGAGGGTGAAATGATAACAAAGCTTAAGTTGAGTTTAATGAAGGAAAGTGAAAATATAAGGGTCACAACATTTGAATCACTTGCAGCTTATATTTGGAGATCAAGAGCAAGAGCATTAAAGCTTAACAACAATGGAGATACAATGTTAACTGTGTTAGTTGGTATACGCAACATGAAGGATTATGATATTGATCCGATACCAAAAGGGTTTTATGGTAATTCTGTTATGGAAGCAAACATTGTGTTAAAAGTGAGTGATCTCAATGAAATGTCACTCTATGAAATTGTTAAGTTGATCAAAGAGGCTAAGAGTGTTGCTTCTACCGCCGATTATGTCAAAAACACAATCGACGCTTTGGAGACAAATTTTAAAGATCGTGTTAACATGGAAAAAAGTACCGGTGCCGTAACGGTTTTGACAGAGTGGAAGCATTTAGGTTTTTTGGGTGAAAATTTAGATTTTGGAGGGAAAGAAATAGTAAATTTAGTACCAGCACCATGCAACTTGTTTGCAACTGTGGAAATGAGTGTTTTCTCATCTTCTAATAAATTTGATGATGTTGTTCCATCAATGAAAGGAGGAGTTAATCTTTTCACATCACTGCCTGTTGATGCCATGCCTAAGTTCAAGGAAGAAATTGAAGCTTTAAAATCTCTTGGTTGA 1395 0.3505 MAYQKATLDLKMKDVELVKPSKFTPFCILSLSTLDNRGIYNNHGEIVHVYRSSTTHHDSNSSSNLCHVFKEALSKALFYYYPFAGRVLKHADDGKLRVHCNPNAENYGVPFLEATANCTLSSINYLDNTDTEIAKHLVLSPQDKSYPLLFMVTKFLCGGFTIGMGISHALCDGFGVSQFFKAIVELANGKSEPSVTPVWERERLVGSITKQPFPLFPLNKESIAFSPFLNQTSSTNIKQYCFKVEGEMITKLKLSLMKESENIRVTTFESLAAYIWRSRARALKLNNNGDTMLTVLVGIRNMKDYDIDPIPKGFYGNSVMEANIVLKVSDLNEMSLYEIVKLIKEAKSVASTADYVKNTIDALETNFKDRVNMEKSTGAVTVLTEWKHLGFLGENLDFGGKEIVNLVPAPCNLFATVEMSVFSSSNKFDDVVPSMKGGVNLFTSLPVDAMPKFKEEIEALKSLG 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00811 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 461 - -
Tsu03g00811 464 Gene3D - 5 213 IPR023213 -
Tsu03g00811 464 Gene3D - 229 457 IPR023213 -
Tsu03g00811 464 PANTHER ACYL TRANSFERASE 4 5 461 - -
Tsu03g00811 464 Pfam Transferase family 12 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00811 Tsu-Chr3 7381010 7385025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00811 8 364 Monolignol Biosynthesis Gene Families AT5G48930 27.642 1.57e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00811 K20240 - gmx:100801843 418.313