Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00809 ATGGCTTATGAGAAAGTTACCCTAAACCTTAAAATGAAAGATGTTGAGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATTCTTTCACTTTCTACGCTTGACAATAGAGGCATCTATAATAACCATTGCGAAACTGTTCATGTATATCGATCATCAACAACTCATCATGATTCTGATTCTAGTTTCAACCTTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTATTATCCTTTTGCAGGTAGACTAGTGAAACATGCTGATGATGAAAAACTTAGAGTCCATTGCAACCCTAATGCCGAAAACTATGGTGTTCCATTCTTGGAAGCGACAACTAATTGCACCCTTTCTTCTATTAATTATTTGGACAATACTGACACAATAATTTCAAAGCATTTGGTGCTTAAGCCTCAGGATAAAAGTTATCCGTTGTTGTTCATGGTGACAAAATTTCTTTGTGGGGGTTTCACAATTGGAATGGGGGTGTTGCATGCTGTTTGTGATGGATTTGGTGCATCTCAATTCTTCAACACAATTGTTGAACTTGCAAAGGGAAGAATTGAGCCCTCAGTGATACCTGTATGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCACTATTCCATATGAACAAAGAATCTATTGCATTTTCACCTTTTTTGAATCAAACCAATAGTACAAACATTAAGCAATATTGTTTTAAAGTTGAGGGTGAAATGATAACAAAGCTTAAGTTGAATTtaatgaaagaaaatgaaaatataaggGTCACGACATTTGAATCACTTGCGGCTTATATTTGGAGATCAAGAGCAAGAGCCTTAAAACTTAACAACAATGGAGATACAATGTTGACTGTGTTAGTTGGTATGCGACGCAGCATGAAGGATTATGATCCAATACCAAAAGGGTTTTATGGTAATTCGGTTATGGAAGCAAACATTATGTTAAAAGTGAGTGATCTCAATGAAATGCCACTCTTTGAAATTGTTAAGTTGATCAAAGAGGCTAAAAATGTTGCTTCAACTGCCGATTATGTCAAAAACACAATCGACTCTTTGGAGACGAATTTTAAGGATCGTGTTAACATGGATAAAAGTACCGGTGCGGTAACGGTTTTGACAGAGTGGAAGCATTTAGGTTTTATGGGTGAAAATTTAGATTttggaagaaaagaaatagTAAATTTAGTACCAGCACCATGCAACTTGTTTGCAAATGTGGATATAAGTGTTTTCTCATCTTCTAATAAATTTGATGATGTTGTTCCATCAATGAAAGGAGGAATTAATCTTTTCACATCACTACCTGATGCTGCCATGCCTAAGTTCAAGGAAGAAATTGAAGCTTTAAGATATCTTGGATGA 1392 0.3463 MAYEKVTLNLKMKDVELVKPSKSTPSCILSLSTLDNRGIYNNHCETVHVYRSSTTHHDSDSSFNLCHVFKEALSKALFYYYPFAGRLVKHADDEKLRVHCNPNAENYGVPFLEATTNCTLSSINYLDNTDTIISKHLVLKPQDKSYPLLFMVTKFLCGGFTIGMGVLHAVCDGFGASQFFNTIVELAKGRIEPSVIPVWERERLVGSITKQPFPLFHMNKESIAFSPFLNQTNSTNIKQYCFKVEGEMITKLKLNLMKENENIRVTTFESLAAYIWRSRARALKLNNNGDTMLTVLVGMRRSMKDYDPIPKGFYGNSVMEANIMLKVSDLNEMPLFEIVKLIKEAKNVASTADYVKNTIDSLETNFKDRVNMDKSTGAVTVLTEWKHLGFMGENLDFGRKEIVNLVPAPCNLFANVDISVFSSSNKFDDVVPSMKGGINLFTSLPDAAMPKFKEEIEALRYLG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00809 463 Gene3D - 229 456 IPR023213 -
Tsu03g00809 463 PANTHER ACYL TRANSFERASE 4 6 460 - -
Tsu03g00809 463 Gene3D - 5 217 IPR023213 -
Tsu03g00809 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 460 - -
Tsu03g00809 463 Pfam Transferase family 11 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00809 Tsu-Chr3 7350879 7352959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00809 8 363 Monolignol Biosynthesis Gene Families AT5G48930 28.338 2.78e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00809 K20240 - gmx:100801843 410.223