Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00808 ATGGCTTATCAAAAGGCTACACTAGACCTTAAAATGAAAGATGTTGAGCTTGTAAAACCATCAAATTTCACTCCTTCTTGTATTCTTTCACTTTCTACACTTGACAATAGAGGCATCTATAATAATCATTGTGAAACTGTTCATGTATATCGATCATCAACAACTCATCATGATTCTGATTCTAGTTTCAACCTTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTATTATCCTTTTGCAGGTAGACTAGTGAAACATGCTGATGATGGAAAACTCAGAGTCAATTGCAACCCTAATACTGAAAACTATGGTGTTCCGTTCTTGGAAGCGACCGCTAATTGCACCCtttcttcaattaattatttggaCAATACTGACACAGAAATTGCAAAGCATTTGGTGCTTAATCCTCAAGATAAAAGTTATCCGTTGTTGTTCATGGTGACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGGTTGTTGCATGCTGTTTGTGATGGATTTGGTGCATCTCAATTCTTCAACACAATTGTTGAACTTGCAAAGGGAAGAATTGAGCCCTCAGTGATACCTGTATGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCACTATTCCCCATGAACAAAGAATCTATTGCATTTTCTCCCTTTTTGAATCAAACCAATAGTACAAATATTAAGCAATATTGTTTTAAGGTCGAGGGTGAAATGATAACAAAGCTTAAGTTGAGTTTAATGAAGGAAAGTGAAAATATAAGGGTTACAACATTTGAATCACTTGCGGCTTATATTTGGAGATCAAGAGTAAGAGCCTTACAACTTAACAACAATGGAGATACAATGTTGACTGTGTTAGTTGGTATGAGACGAAACTTGAAGGATTTTGATCCGATACCAAAAGGGTTTTATGGTAATTCTGTTATGGAAGCAAACATTGTGTTAAAAGTGAGTGATCTCAATGAAATGTCACTCTTTGAAATTGTTAAGTTGATCAAAGAGGCTAAAAATGTTGCTTCAACCGCCGATTATGTCAAAAACACAATCGACTCTTTGGAGACGAATTTTAAGGATCGTGTTAACATGGAAAAAAGTACTGGTGCAGTAACGGTTTTGACTGAGTGGAAGCATTTAGGTTTTATGGGTGAAAATGTAGATTTTGGAGGGAAAGAAATAGTAAATTTAGTACCAGCACCATGCAACTTGTTTGCAACTGTGGAAATGAGTGTTTTCTCATCTTCTAATAAATTTGATGATGTTGTTCCATCAATGAAAGGAGGAATTAATCTTTTCACATCACTACCTGTTGCTGCCATGCCTAAGTTTAAGGAAGAAATTGAAGCTTTAAGATCTCTTAATTAG 1392 0.3513 MAYQKATLDLKMKDVELVKPSNFTPSCILSLSTLDNRGIYNNHCETVHVYRSSTTHHDSDSSFNLCHVFKEALSKALFYYYPFAGRLVKHADDGKLRVNCNPNTENYGVPFLEATANCTLSSINYLDNTDTEIAKHLVLNPQDKSYPLLFMVTKFLCGGFTIGMGLLHAVCDGFGASQFFNTIVELAKGRIEPSVIPVWERERLVGSITKQPFPLFPMNKESIAFSPFLNQTNSTNIKQYCFKVEGEMITKLKLSLMKESENIRVTTFESLAAYIWRSRVRALQLNNNGDTMLTVLVGMRRNLKDFDPIPKGFYGNSVMEANIVLKVSDLNEMSLFEIVKLIKEAKNVASTADYVKNTIDSLETNFKDRVNMEKSTGAVTVLTEWKHLGFMGENVDFGGKEIVNLVPAPCNLFATVEMSVFSSSNKFDDVVPSMKGGINLFTSLPVAAMPKFKEEIEALRSLN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00808 463 Gene3D - 5 214 IPR023213 -
Tsu03g00808 463 Pfam Transferase family 12 458 - -
Tsu03g00808 463 PANTHER ACYL TRANSFERASE 4 5 460 - -
Tsu03g00808 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 460 - -
Tsu03g00808 463 Gene3D - 229 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00808 Tsu-Chr3 7346390 7348176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00808 8 363 Monolignol Biosynthesis Gene Families AT5G48930 28.219 1.25e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00808 K20240 - gmx:100801843 421.779