Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00807 ATGGCTTATCAAAAAGCTATACTAGACCTTAAAGTGGAAGATGTTGTGCTTGTAAAACCATCAAAGTCCACTCCTTCTTGTATTCTTTCTCTTTCTACACTTGATAATAAAGTCTCCAATAATAACATTTGCCAATTTGTTCATGTATATCGATCCTCAACGATTCATGATTCCGATTCCAGTTTCAATCCTTGTCATGACTTCAAAGTAGCACTCTCTAAGgctttattttattactatCCTCTCGCAGGTAGACTAGTGACGCATGTTGATGGAAAACATAGAGTCGAGATCAAATCCAACAATGCAGAATTTGGTGTTCCAGTCTTGGAAGCTATTGCAAAATGCACCCTTTCTTCTGTTCATTACTTAGACGTTAATGACATTGAAATGGCTAAACACTTGGTTCTTGATTTTCCTTCTCCTCAAGATAAAAGCTACCCTTTGGTTTTCATGGTGACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGAATATCACATGCACTTTGTGATGGATTTGGTGTATCTCAATTCTTCAAAGCAATTGTTGAACTTGCAAATGGAAAAAGTGAGCCATCAGTGAAACCTGTGTGGGAAAGAGAGAGACTAGTTGGATCAATAAATAAACAACCATTTCATCTATTTCCCATGGACAAAGAATCTGCTGCATTTACACCTTTCCTTAATCAAATCAATAGTACAGATATTAAGCAATATTGTTTTAAAGTAGAGGGTGAAGTTATAGCAAGGCTTAAGTTGAGTTTAATGAAGGAAAGTGAAAATATGAAGTTCACAACTTTTGAATCACTTGCAGGTTATGTATGGAGGTCAAGAGCAAGAGCCTTAAAACTTAGCAACAATGGAAAAACAATGCTAGATATTTTAGTTAGTATTAGGCGCCATATGAAGGGTTATGATCCCTTGCCTGAAGGGTATTATGGGAATTCTATTGTGGATGGAAAACTTGTGCTAAAAGTTAGTGAGCTCAATGAAAGACCACTCTATGAAATTGTTAAGTTGATCAAAGAGACTATAAATGTTGCTTCCACCACTGATTATGTCACGAATTGGATCGACACTTGGGAGACGATTAATCAAGAAGAGGATATCAGTACGGAATTGGAAGCTAGTGGTGCAGTAACAGTTCTAACAGAGTGGAAGCATTTGGGTTTCATGGAAAATGTAGATTTTGGAAAGAATGAAGTAGTGAATTTTGTACCAGCACCATGTAAGATGCTTGCAACTGTGGATGTCTGCATTTTCATGCATCCTAGTaaaattgatgatgataatcCTTTGATGAAAGGAGGTGTTAAGATTTTCACATCACTGCCTGTTGCTTCCATGCTCAAATTCAGGGACGAAATTGAAGCTTTAAAGGTtctttattga 1398 0.3591 MAYQKAILDLKVEDVVLVKPSKSTPSCILSLSTLDNKVSNNNICQFVHVYRSSTIHDSDSSFNPCHDFKVALSKALFYYYPLAGRLVTHVDGKHRVEIKSNNAEFGVPVLEAIAKCTLSSVHYLDVNDIEMAKHLVLDFPSPQDKSYPLVFMVTKFLCGGFTIGMGISHALCDGFGVSQFFKAIVELANGKSEPSVKPVWERERLVGSINKQPFHLFPMDKESAAFTPFLNQINSTDIKQYCFKVEGEVIARLKLSLMKESENMKFTTFESLAGYVWRSRARALKLSNNGKTMLDILVSIRRHMKGYDPLPEGYYGNSIVDGKLVLKVSELNERPLYEIVKLIKETINVASTTDYVTNWIDTWETINQEEDISTELEASGAVTVLTEWKHLGFMENVDFGKNEVVNFVPAPCKMLATVDVCIFMHPSKIDDDNPLMKGGVKIFTSLPVASMLKFRDEIEALKVLY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00807 465 PANTHER ACYL TRANSFERASE 4 6 462 - -
Tsu03g00807 465 Pfam Transferase family 17 460 - -
Tsu03g00807 465 Gene3D - 6 215 IPR023213 -
Tsu03g00807 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 462 - -
Tsu03g00807 465 Gene3D - 230 457 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00807 Tsu-Chr3 7334536 7336750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00807 8 410 Monolignol Biosynthesis Gene Families AT5G48930 26.634 1.75e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00807 K20240 - gmx:100801843 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00807 03 7334536 7336750 Tsu03g00807 03 7334536 7336750 ECH