Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00804 ATGGCTTATCAAAAAGCTACACTAGACCTTAAAATGAAAGATGTTGTGCTTGTAAAACCATCAAAGTCCATTCCTTCTTGTattctttctctttctaccCTTGACAATAAAGTCTCCAATAATAACATTTGTCAAACTGTTCATGTGTATCGATCGTCAACAATTCATGATTCAGATTCCAGTTTCAATCCTTGTCATGACTTCAAAGCAGCACTCTCAAAGgctttattttattactatCCTCTTGCAGGTAAACTAGTGACACATGATGATGGAAAACTTAGAGTCGAGATCAATGCCAGCAATGTAGAATTTGGTGTCCCAATCTTGGAAGCTACTGCAAATTGCACCCTTTCTTCTCTTCATTACTTAGACGGTAATGACACTGAAATAGCAAAACACTTGGTACTTgattttccttgtcctcaagatAAAAGCTACCCTTTGGTTTTCATGGTTACAAAATTTCTTTGTGGTGGTTTCACAATTGGAATGGGAGTGTCACATGCAGTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAAGCAATTGTTGAACTTGCAAATGGAAAAAGTGAGCCATCAGTGAAGCCTGTATGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCATCTATTTCCCATGGACAAAGAATCCGTTTCATTCACACCTTTCTTGAATCAAATCAATAGCACAGATATAAAGCAATATTGTTTTAAAGTGGAGGGTGAAATGATAGTAAGGCTTAAGTTGAGTTTAATGAAGGAGAGTGAAAATATAAAGTTCACAACTTTTGAATCACTTGCAGGTTATGTGTGGAGGTCAAGAGCAAGATCCTTAAAACTTAGTAATAATGGGAAAACAATGTTGAATATTTTGGTTGGTATTAGACGCAACATGAAGGGTTATGATCCCTTGCCTGAAGGATATTATGGAAATTCTATTGTGGATGGAAAACTTGTGTTACAAGTTAGTGAGCTCAACGAAAAGCCACTCTATGAAATTGTTAAGTTGATCAAAGAGACTATTAATGTTGCTTCCAACACCGATTACGTTACAAATTTGATCAATACTTGGGAGACGATTAATCAAGACGAGGATATCAGCACGGAATTGGAAGCTAGTGGTGCAGTAACACTTCTAACAGAGTGGAAGCATTTGGGTTTCATGGAAAATGTAGATTTTGGAAAGAATGAAGTAGTGAATTTTGTACCAGCACCATGTAAGACGCTTGCAACTGTGGATACATGCATTTTCATGCCTCCTAATAAATTTGATGACGATGATCCTTCAATGAAAGGAGGTGTTAAGATTTTCACATCACTCCCTGTTGCTTCCATGCCTAAATTCATGGACGAAATTGAAGCTTTAAAGGTtctttattga 1398 0.3526 MAYQKATLDLKMKDVVLVKPSKSIPSCILSLSTLDNKVSNNNICQTVHVYRSSTIHDSDSSFNPCHDFKAALSKALFYYYPLAGKLVTHDDGKLRVEINASNVEFGVPILEATANCTLSSLHYLDGNDTEIAKHLVLDFPCPQDKSYPLVFMVTKFLCGGFTIGMGVSHAVCDGFGGSQFFKAIVELANGKSEPSVKPVWERERLVGSITKQPFHLFPMDKESVSFTPFLNQINSTDIKQYCFKVEGEMIVRLKLSLMKESENIKFTTFESLAGYVWRSRARSLKLSNNGKTMLNILVGIRRNMKGYDPLPEGYYGNSIVDGKLVLQVSELNEKPLYEIVKLIKETINVASNTDYVTNLINTWETINQDEDISTELEASGAVTLLTEWKHLGFMENVDFGKNEVVNFVPAPCKTLATVDTCIFMPPNKFDDDDPSMKGGVKIFTSLPVASMPKFMDEIEALKVLY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00804 465 Pfam Transferase family 16 460 - -
Tsu03g00804 465 Gene3D - 230 457 IPR023213 -
Tsu03g00804 465 PANTHER ACYL TRANSFERASE 4 5 462 - -
Tsu03g00804 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 462 - -
Tsu03g00804 465 Gene3D - 5 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00804 Tsu-Chr3 7321145 7323360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00804 8 410 Monolignol Biosynthesis Gene Families AT5G48930 26.253 2.41e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00804 K20240 - gmx:100801843 473.011