Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00802 ATGGCTTATCAAAAAGCAATACTAGACCTTAAAATGAAAGATGTTGTGTTTGTAAAACCATCAAAGTCCATTCCTTCTTGTATTCTTTCTCTTTCTACACTTGACAATAAAGTCTCCAATAATAACATTTGCCAAACTGTTCATGTGTATCGATCGTCAACAATTCATGATTCAGATTCTAGTTTCAATCCTTGTCATGATTTCAAAGAAGCACTCTCAAAGgctttattttattactatCCTCTTGCAGGTACACTAGTGACACATGATGATGGAAAACTTAGAGTCGAGATCAATGCCAGCAATGTAGAATTTGGTGTCCCAATCTTGGAAGCTACTGCAAATTGCACCCTTTCTTCTCTTCATTACTTAGACGGTAATGACACTGAAATAGCAAAACATTTGGTACTTgattttccttgtcctcaagatAAAAGCTATCCTTTGGTTTTCATGGTTACAAAATTTCTTTGTGGTGGTTTCACAATTGGAATGGGAGTGTCACATGCAGTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAAGCAATTGTTGAACTTGCAAATGGAAAAAGTGAGCCATCAGTGAAGCCTGTATGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCAACTATGCCCCATGGACAAAGAATCTGTTGCATTCACACCTTTCTTGAATCAAATCAATAGCACAGATATAAAGCAATATTGTTTTAAAGTGAAGGGTGAAATGATAGCAAGGCTTAAGTTGAGTTTAATGAAGGAGAGTGAAAATGTAAAGTTCACAACTTTTGAATCACTTGCAGGTTATGTGTGGAGGTCAAGAGCAAGATCCTTAAAACTTAGTAACAATGGGAAAACAATGTTGAATATGTTAGTTGGTATTAGACGCAACATGAAGGGTTATGATCCCTTGCCTGAAGGGTATTATGGAAATTCTATTGTGGATGGAAAACTTGTGTTACAAGTTACTGAGCTCAATGAAAAGCCACTCTATGAAATTGTTAAGTTGATCAAAGAGACTATAAAGGTTGCTTCCACCACTGATTATGTCACGAATTCGATTGACAATTGGGAGACGATTAATCAAGAAGAGGATATCAGTACGGAATTGGAAGCTAGTGGTGCTGTAACAGTTCTAACAGAGTGGAAGCATTTGGGTTTCATGGAAAATGTAGATTTTGGAAAGAATGAAGTAGTGAATTTTGTACCAGCACCATGTAAGATGCTTGCAACTGTGGATACATGCATTTTCATGCCTCCTAATAAATTTGATGACGATGATCCTTCAATGAAAGGAGGTGTTAAGATTTTCACATCACTCCCTGTTGCTTCCATGCCTAAATTCATGGACGAAATTGAAGCTTTAAAGGTtctttattga 1398 0.3555 MAYQKAILDLKMKDVVFVKPSKSIPSCILSLSTLDNKVSNNNICQTVHVYRSSTIHDSDSSFNPCHDFKEALSKALFYYYPLAGTLVTHDDGKLRVEINASNVEFGVPILEATANCTLSSLHYLDGNDTEIAKHLVLDFPCPQDKSYPLVFMVTKFLCGGFTIGMGVSHAVCDGFGGSQFFKAIVELANGKSEPSVKPVWERERLVGSITKQPFQLCPMDKESVAFTPFLNQINSTDIKQYCFKVKGEMIARLKLSLMKESENVKFTTFESLAGYVWRSRARSLKLSNNGKTMLNMLVGIRRNMKGYDPLPEGYYGNSIVDGKLVLQVTELNEKPLYEIVKLIKETIKVASTTDYVTNSIDNWETINQEEDISTELEASGAVTVLTEWKHLGFMENVDFGKNEVVNFVPAPCKMLATVDTCIFMPPNKFDDDDPSMKGGVKIFTSLPVASMPKFMDEIEALKVLY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00802 465 Pfam Transferase family 16 460 - -
Tsu03g00802 465 PANTHER ACYL TRANSFERASE 4 6 462 - -
Tsu03g00802 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 462 - -
Tsu03g00802 465 Gene3D - 230 457 IPR023213 -
Tsu03g00802 465 Gene3D - 7 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00802 Tsu-Chr3 7304861 7308664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00802 8 410 Monolignol Biosynthesis Gene Families AT5G48930 26.014 4.27e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00802 K20240 - gmx:100801843 476.092