Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00799 ATGGCTTATCAAAAAGCTCTCTTAAAACTTGAAATGAATGATGTTGTGCTTGTAAAACCATCAAAATGTAGACTAGTGAAGCATGCTCATGATGGAAAGCTTAGAGTCAAGTGCAATCCTAACGACGAAAATTATGGTGTTCCATTCTTGGAAGCAATTGCTAAATGCACCCTCTCTTCTCTTAATTACTTGGACAATACCGACACTGATATTGCGAAACACTTGATGCTTGATCTTCCTTCTCCTCGCGATAAAACTTACCCTTTAGTGTTAATGGTGACAAAATTTCTTTGTGGAGGCTTCACAATTGGAATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTGGATCTCAATTCCTCAAAGCACTTGTCGAACTTGCAAGTGGAAGAATCGAGCCATCGGTGAAACCTGTGTGGGAAAGAGAGAGACTAATTGGTTCAATAACTAAACAACCTTTTCAATCCCTCATCGATAGAGATTCAGCTGCATTTTCTCCTTTTCTTCAACCGAATACAGTTATTAAACAATATTGTTTTAAGATTGAAAGTGATGTGATAAAAAGACTCAAGATGAGTTTGATGAAAGAAAGTGAAAGTCATTCTAATATCACAACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAAAGCAAGAGCATTGAAACTTAGTTCCATTGGAAAAACAGTGTTGATTATGGAAGTTGGTATGAGAGGCAAAAACTTAaaggattatgaatatacacttCCTGAAGGGTATTATGGGAATGCTATTGTGGATGCAGATCTTGTGTTAAAAGTTAATGAGCTTAATGAAAAACCACTCTCTGAGATTGTTAAGCTTATtaaagagactaaaaatattgCTTCGACGACTGATTATGTGAGAAAATCGATCGACACTTTGGAGACGATAAAACAGGAGGAAGACGAAGAAGACGAAGATTTGAACATTGATGATGCAGTAATGTATGTGACAGATTGGAAGCATTTAGGTTTCATGGAAAGTGTAGATTTTGAAGGGTATGAATTAGTGAATTTAGTGCCAGCACCATGCAACTTGTTTAAGTGTCTTGATACATGCATTCTCATGTCTCCGAATAAAATTGATGATCCATTAGAAGGAGGAGTTAGGATTTTTATATCTCTTCCTGTTGCTGCCATGCCTAAGTTTAGGGAAGAAATTGATGGTCTCAGATTTCTTTGA 1209 0.3598 MAYQKALLKLEMNDVVLVKPSKCRLVKHAHDGKLRVKCNPNDENYGVPFLEAIAKCTLSSLNYLDNTDTDIAKHLMLDLPSPRDKTYPLVLMVTKFLCGGFTIGMGVSHALCDGFGGSQFLKALVELASGRIEPSVKPVWERERLIGSITKQPFQSLIDRDSAAFSPFLQPNTVIKQYCFKIESDVIKRLKMSLMKESESHSNITTFESLAAYVWRSKARALKLSSIGKTVLIMEVGMRGKNLKDYEYTLPEGYYGNAIVDADLVLKVNELNEKPLSEIVKLIKETKNIASTTDYVRKSIDTLETIKQEEDEEDEDLNIDDAVMYVTDWKHLGFMESVDFEGYELVNLVPAPCNLFKCLDTCILMSPNKIDDPLEGGVRIFISLPVAAMPKFREEIDGLRFL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00799 402 Gene3D - 15 155 IPR023213 -
Tsu03g00799 402 Gene3D - 163 396 IPR023213 -
Tsu03g00799 402 PANTHER ACYL TRANSFERASE 4 24 399 - -
Tsu03g00799 402 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 24 399 - -
Tsu03g00799 402 Pfam Transferase family 24 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00799 Tsu-Chr3 7283691 7285212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00799 15 354 Monolignol Biosynthesis Gene Families AT5G48930 26.722 1.63e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00799 K20240 - gmx:100783730 367.081