Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00797 ATGGCTTCTTCAACTCTTCAATGGCTAAGCCTAGTTGGTATAATTTGGCTCCAAGTCATAAATGGAACAAACTCAAATTTCCCTGCTTACTCTTCCCAACTAAAACAGCTTCTTTCCATTTCTCAAATTCAGCTTAATAACCTTGCTTTTGCATCCGATGCCGGCAAACTTTTTGGTTGGTTTTCCGGGCTTGCAGCTATTTACCTCCCCCTCTGGCTCGTCCTCACCATTGGTTCGTTTCTCGGACTAATCGGTTATGGTGTGCAATATCTCTTCATAACCAACCAAATTTCTTCTCTATCATATTGGCATGTGTTCTTACTAACTTTCCTTGCCGGGAATAGCATTTGTTGGATCAACACCGTCTGTTATGTCGTTGCCATACGAAACTTTCTATCCGATCGCCAAGTTGCCGTTGGATTAACAACTAGTTATCAAGGATTAAGTGCAAAGATTTATACCAatattgttgatgttgtttCTTCACACAATAAGGCtaaaacttttcttttcttgaacTCTTTTGTACCTGTTGTAGTTAGCTTTATAGTAGCTCCTCTAGTAAGAGAAATCAAAGTGAAAAATCCTAAGCATTCTAGTGTTGGTTTTGCTTTGATGTTTGTTATCACAATTGCAACTGGAATATATGCTGTAATGAGTAGCTTGCAAATTTTCACAAACAAAATATCCTCACTCGGTGTCCTTACCGGTATTTTAGTATCACTTTTCTTACCACTATTGCTTCCAATTTCTGTGAAGATCAAGGAACTATTTGAATCATGgcataaaaaaagagaaagattaAGAATATACCATTTTACCATGGAAGAGAATACTACATATGAAGAGAGAATAGAGAATGAGGTAAAAGAAGGTGAAGATAGTTGTGAATTTCAAGAGGTTGGTGTAATGGAAGAAATTGGAGTGAAGTTAATGTTGAGAAGAATAAATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAATTGGTTTAGTCTTTCTTAACAATTTGGGACAAATAGCTGAATCTAGAGGTTGTTCTGCTACTTCATCTTTGGTGTCTTTGTCGTCTTCCTTTGGATTCTTCGGCCGTCTCATTCCGTCTCTTATGGACTACTTCTACAGgGGAAAACATTCAATTTCAAGACCTACATTTATGGTATCAGTTATGGCACCAACAGCAGGTGCATTTTTCTTACTTCTCAACAAAACTGATCTTTCCCTTTACATAAGCACAGCTGTGATTGGAGTTTCTACTGGAGCAATCACTTCCACTGCAATTTCCACAACAACTGAACTATTTGGAACAAAGAATTTCTCTGTAAATCATAATGTGGTTGTGGCAAATATTCCAATGGGATCCTTTTTGTTTGGTTACTCAGCTGCATTTATTTACCATAAAGAAGGAAATGAACATGGAAAATGCATGGGTATGGAATGTTATAGTAACACTTTTATCATTTGGGGTTCCTTTTGTTGCCTTGGAACTTTATTAGCTTTGATTCTACATTTTAGAACTTGTAAGTTTTACTCACAAAAACAATAG 1551 0.354 MASSTLQWLSLVGIIWLQVINGTNSNFPAYSSQLKQLLSISQIQLNNLAFASDAGKLFGWFSGLAAIYLPLWLVLTIGSFLGLIGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVAIRNFLSDRQVAVGLTTSYQGLSAKIYTNIVDVVSSHNKAKTFLFLNSFVPVVVSFIVAPLVREIKVKNPKHSSVGFALMFVITIATGIYAVMSSLQIFTNKISSLGVLTGILVSLFLPLLLPISVKIKELFESWHKKRERLRIYHFTMEENTTYEERIENEVKEGEDSCEFQEVGVMEEIGVKLMLRRINFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLIPSLMDYFYRGKHSISRPTFMVSVMAPTAGAFFLLLNKTDLSLYISTAVIGVSTGAITSTAISTTTELFGTKNFSVNHNVVVANIPMGSFLFGYSAAFIYHKEGNEHGKCMGMECYSNTFIIWGSFCCLGTLLALILHFRTCKFYSQKQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00797 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 515 - -
Tsu03g00797 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 515 - -
Tsu03g00797 516 Gene3D MFS general substrate transporter like domains 197 506 IPR036259 -
Tsu03g00797 516 SUPERFAMILY MFS general substrate transporter 8 508 IPR036259 -
Tsu03g00797 516 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00797 Tsu-Chr3 7267119 7269174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00797 1 515 Nodulin-like Gene Family AT2G30300 48.479 6.09e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00797 - - gmx:100800763 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00797 03 7267119 7269174 Tsu03g00797 03 7267119 7269174 ECH