Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00794 atggcTTTCTTTCACTCACATTGTAACATATTTTGCATCTCTATTTTGTTTTCCTTGTTGGCCATGTGCTCTGCTCAACTATCTTCAGATTTCTATGGCTCAACATGCCCTAAAGCCCTCTCTATCATAAATTCTGCAGTGTGTAGCGCCGTTGCAAAAGAGCATCGCATGGGCGCTTCGTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAAtGGATGTGATGCATCAGTCCTCCTAGATGACACTTCAAGCTTCACCGGAGAGAAATCAGCCGGCGCAAATGTGAATTCTCTGCGAGGTTTCGAAGTGATTGACAACATTAAAACTCAATTGGAGACTGCTTGTCCTGGAATTGTTTCTTGTGCAGAtattgttgctgctgctgctcgTGATTCTGTTGTAGCATTGGGTGGTCCATCATGGAGTGTTGGATTAGGTAGAAGAGATTCAACAACTGCAAGTAAAGATACTGCCACTAGTGATATTCCATCCCCTCTAATGGATCTTAGTGACCTCATATCTGCTTTTTCAAATAAGGGATTTACCGCCAAAGAGATGGTTGTCCTCTCAGGAGCTCATACAACAGGACAAGCCAGGTGTCAGTTGTTTAGAGGGCGGATTTATAATGAAACAATCATTGACTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGCACTGGTGGTGATAGCAACTTAACCTCACTTGATGTCACAACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTCTACATTCTGATCAACAACTCTTTAGTGGTGGTTCTACTGATTCACAAGTAACTACTTATAGCACTAGCCCTTCAACTTTCTCTGCAGATTTTGCTAGTGCTATGGTGAAAATGGGAAACCTCAGTCCATTAACAGGGAACAATGGCGAGATTCGTACTAATTGCGGCAAAATTAACTAA 960 0.399 MAFFHSHCNIFCISILFSLLAMCSAQLSSDFYGSTCPKALSIINSAVCSAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFEVIDNIKTQLETACPGIVSCADIVAAAARDSVVALGGPSWSVGLGRRDSTTASKDTATSDIPSPLMDLSDLISAFSNKGFTAKEMVVLSGAHTTGQARCQLFRGRIYNETIIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFSADFASAMVKMGNLSPLTGNNGEIRTNCGKIN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00794 319 SUPERFAMILY Heme-dependent peroxidases 26 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 Gene3D - 30 315 - -
Tsu03g00794 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PANTHER PEROXIDASE 72-RELATED 19 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tsu03g00794 319 Gene3D Peroxidase, domain 2 164 298 - -
Tsu03g00794 319 PANTHER PEROXIDASE 19 319 - -
Tsu03g00794 319 Pfam Peroxidase 46 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601|GO:0042744
Tsu03g00794 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00794 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00794 Tsu-Chr3 7238206 7240757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00794 22 319 Peroxidase AT5G05340 62.667 2.80e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00794 K00430 - gmx:100818176 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00794 03 7238206 7240757 Tsu03g00794 03 7238206 7240757 ECH
Tsu03g00794 03 7238206 7240757 Tsu07g01412 07 12628207 12629898 ECH
Tsu03g00794 03 7238206 7240757 Tsu05g03413 05 45445062 45447182 ECH