Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00793 ATGGCACATTCTCCTAATTTTTATGTTGCATTGGCTTTGATCTTCCTTCTTATAGGGACCTCTTCAGCTCAACTTTCTGAGAacttttattctaaaaaatgtcCCAAAGTTTTTAACACGGTTAAATCTGTTGTTAGTTCAGCTGTGGCTAAAGAACGTCGCATCGGAGCATCTCTCCTTCGCCTCTTCTTCCATGACTGCTTTGTTGATgGTTGTGATGGGTCAATACTACTTGATGACACTTCATCCTTCAAAGGAGAGAAAACTGCAGCTCCTAACAACAATTCAGTGAGAGGTTATGAAGTAATTGATGCTATAAAATCTAAGGTGGAAGCAATATGCCCTGGTGTTGTCTCATGTGCTGATATTGTGGCCATTACTGCTCGTGACTCTGTTGTCATTCTTGGAGGGCCATTTTGGAATGTAAAAGTTGGAAGAAGAGATTCAAGGACAGCTAATTTCACTGCAGCTAACACTGGTGTGATTCCACCTCCTACATCTAACCTAACTAACCTTATCTCAACTTTTCAAGCTCAAGGACTTTCTACCAAGGACATGGTTGCTTTATCTGGAGCACACACAATAGGGAAATCAAGATGTACAAGTTTCAGAAACCACATATACAATGACAGCAACATTGATAGTACATTTGCTAAGATAAGGCAAAAGAAATGTCCAAAGACAAGTGGATCAGGAGACAACAATCTTGCAAATCTAGATTTTAGAACTCCAACTCATTTTGACAACAATTACTACAAGAATCTCATTATCAAAAGAGGATTACTTCATTCTGATCAAGTACTCTTCAATGGTGGATCCACTGATTCACTTGTTAAAACTTATAGCCAGAATGATAAAGCCTTTGATTCTGATTTTGTTACTGCAATGATTAAGATGGGAAATAATAAGCCTTTAACCGGGAAACAAGGAGAGATTAGGAAGAATTGCAGGAGATTGAATTAG 963 0.3769 MAHSPNFYVALALIFLLIGTSSAQLSENFYSKKCPKVFNTVKSVVSSAVAKERRIGASLLRLFFHDCFVDGCDGSILLDDTSSFKGEKTAAPNNNSVRGYEVIDAIKSKVEAICPGVVSCADIVAITARDSVVILGGPFWNVKVGRRDSRTANFTAANTGVIPPPTSNLTNLISTFQAQGLSTKDMVALSGAHTIGKSRCTSFRNHIYNDSNIDSTFAKIRQKKCPKTSGSGDNNLANLDFRTPTHFDNNYYKNLIIKRGLLHSDQVLFNGGSTDSLVKTYSQNDKAFDSDFVTAMIKMGNNKPLTGKQGEIRKNCRRLN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00793 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Tsu03g00793 320 Gene3D Peroxidase, domain 2 163 299 - -
Tsu03g00793 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 Gene3D - 28 317 - -
Tsu03g00793 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Tsu03g00793 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tsu03g00793 320 PANTHER PEROXIDASE 72-RELATED 10 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g00793 320 PANTHER PEROXIDASE 10 318 - -
Tsu03g00793 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00793 Tsu-Chr3 7229838 7234090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00793 8 320 Peroxidase AT5G58400 65.815 7.35e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00793 K00430 - gmx:100813250 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00793 03 7229838 7234090 Tsu03g00793 03 7229838 7234090 ECH
Tsu05g02983 05 40142293 40147323 Tsu03g00793 03 7229838 7234090 ECH
Tsu04g01514 04 15814431 15818335 Tsu03g00793 03 7229838 7234090 ECH
Tsu03g00793 03 7229838 7234090 Tsu05g02974 05 40037592 40040349 PCT