Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00790 atGGCTAGTCTGCTTACTGATTTGGTGAAGCCACATGTGGAGAAATTGATAAATGGGGCAATCACAGAGTCGAGTTATATATGTTGCTTCACCTGCATTGCTAAGGATTTCGAAGAAGAAAAAGCTAGGTTGGAACCAGAATGGACAACTTTCAAGCAACGTGTTGATGTGGCAAAAAGAAAAGGGGAAGATGTTCAAGATAATGCTCTTTCTTGGGAAGAAGAAGCTGAAAAGCTTATTCAAGAAGacaccaaaacaaaagaaaaatgtttttttggacTTTGTTGTCATTGCATATGGCGATATAGAAGGGGAAAGGAACTGGCAAATAAGAAGGAGCAAatcaaaaaattgatggaaaCTGGAAAGGAACTTGCAATCGGACTGCCCGTTCGTCTTCCAGATGTTGAACGTTATTCATCCCAATACTATATTCCTTTTAAAAGTAGGGAATCCAAATACAAAGAGCTTTTGGATGCACTGAAcgatgaaaaaaattatatagttgGGCTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGATCAGGGAATTGGGCAAGGAACTTAAGCAGTCCAAACAATTTACTCAAGTTGTTGATACGACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGATGACTGTAATGAATCAGACCGATCCAAAAAACTATGGAGCAGATTAACCAAAGGTGAgaagattcttataatattggaTGATGTGTGGGGAGATATCGATTTTGATGAAATAGGGATTCCACACATTGACAATCACAAAGGTTGTAGAGTTTTTGTAACCACGCGCAATATGTGGGTGTGCAACAGACTAGGATGCAGTAAGACAATCCAACTTGATCTCTTATCTGAAGAAGATGCATGGATCATGTTCCAAAGTCATGCTGGTCTAACCAaagtttcaacaaaaaatttgcTTGACAAGGGCCGTAAAATCGCAAAAGAATGCAAAAGTTTACCGATTGCAATTGCTGCTATCGCTAGTAGTTTAAAGGGCGAGCAACGTCGGGAAGAGTGGGATGTGGCCTTAAATTCCTTGAAACATATATCGATGCGATTGCGAGGTGTTGATAAAGATTTGGTTGATGTTTATAAATGTTTGAAGTTTAGCTATGATTATCTCAAGGACAGAAATGCTGAGGAATTGTTCCTCTTATGTTCTGTATTCCAAGAAGATGAGGAGATCACTATTAAAATTCTAACCAGACTCAGCATAGGAGTCGGTCTCTTTGGGGAAGGTTATGACAAATACAACAATGCTCGAAATCTGTTAATTGTAGCAAAAAATAAACTCCTCGATTCCTGTTTACTGTTGAAGACAGATGAAGGAGATGTAAAAATGCATGACTTGGTTCGTGAAGTAGCCCAATGGATAGCGAGCGAAGAGATTTTAGTAGTAAATTTTTCCAACAAAAACCAAAAGTCAGTAGTTGGAAGGAGTAATatcaaatatttgttatttgatgGCACCCCAAATGATTTGTGTTCCCCTAggtttgatggttctaaactgAAGATTCTGATTTTAATCATGGGCACATGTTGCTTTGGGGattcattctttgaaaatattgCAGGGCTTCGAGTTTTGAATCTAATAGCAGATTACCAAACTATACCATTACCACAATCAATTCGGTTATTGACGAATATTCGTTCTCTATTAGTTGAAAGTGCTGACTTGGGTGACATCTCTGTTTTGGGAAGCCTTCAAAGTCTTGAGACACTTGATTTGAATCTTTGTACAATTGAAGAACTTCCACAAGAAATTGCAAAATTGAAGGAACTTAGATTGTTGAACTTCGACGACTGTACAATTGAAAGTAATAATCCATTTGAAGTTATCCAGAGATGCCCATCCCTTGAAGAATTGTACTTTGAGGATAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTACATTGGAAAGGTATCATCTCACTCAAGGTTATAGTAAGTTTTACGATTCTTCACTATCAAAAAGTGTGTCTCTTGAAAATGACTATTTGTCAGAAGCAACATTTAAGTATGTGATGCAAACAGCAGAGCATCTTAAGTTAGAAAGAATTAAGAAGGGATGGAGAAATATTATGCCTGAAATTGTTCCTATAGATGAAGGTATGAATGATCTAATTGAGCTTCATTTGAAAGATGATTCACAACTACGGTGCCTCGTAGACACTGAGCATATTGGTTGTTCTCAATTACCAAATGTATTTTCCAAGTTGGTTGTCCTAAAGCTCTTCAAAATGAATAATTTGGAAGAATTATGCAATGGTCCCATCTCCTTTGACTCTATGAACAGTTTAGAGAAACTGACTATCATGTCTTGTGGAAATTTGAGAAGCCTGTTCAAAGGCAATCTAAATCTCTGCAATCTAAAGACTGTGAAAATAGAAGAATGCTCCAAATTAGTTTCTGTTTTTCATCTGTCACCATCTGGAAGCCTGCCGTTGTTGGAAGTATTGAATATAAGTGGATGTCATCAATTGGTAAACATATTTACCAATGAAAAGGGAGTGGATGATCCGATTGAAGAAATATTACTTCCAAAGCTCAAAGTTGTCAAAATAGAAGAATGTAATGAATTGACTTACATATTTGACCAAGAAGTCAAACTGGATTCACTAATACAATTGGAGCTAGAAGATGTGTCAAATTTCATTGACATATTTCCAAAATCATGTGATTCCAATTCCAAGGAAGAAACACAATTGCAATTGCAGGAGGTGGAGCCAATGAAATCGAATATATTATCTTGTTGCTATGGATACAAATCGAAGGGTAGTACCACAAATACTAAAGTCCCCACGGAAACAAGTTCATATTGTCTTAACATATGGGAACGTGCTCAATGTCTTTCAAGACTATCACATATCATCTGCAATATTAAAGTGATCACATTGATAAGTGTTCCAAACATAAAATCAGTGTTTGTGTTATCTATTGCACCAAAAATGTTATTGAAGAGCTTGACTATTACAGGATGTGATGAATTGGAGCACATAGTagtagacattggagatggcaGTGGTGGAAATGAATTGGGCATTAATGTCTTCCCCAAATTAAAAGAGCTCTATGTTGGAAGTTGTAAGAAATTGAAATACATATTTGGGCACATCAATGCTAGTAATgataatgatcaaaacaacaatgaGATTCAACTTCATCTTCCAGCATTGAAAAGTCTCAAGCTCTCATCTCTCCCAAGTTTAATCGGCATTTGTCCCAAACAATATCACACAACATTTTCACCTTTGAAAGTACTTGAATTCCATAATTGCTCTCAGGATGATGTTAAATCTATTGGTGATTTTACCTTCCTTACTTCGATTTCAAGATACCAGGACAATACAACTGTCAAGCAATTCAGTGGGAACATAGAACATTTTCTAGCTTTGGAAAGTCTCAAGGTATCTCAATCCAATGTAGAAACTATATTATGTCTCAATGAAAAAAGTGAGCCGGAGATAGACTTGGGGTTGCAAGACATTATTTTGAGAAAACTACCTATGATGATATATCCTTTTGTGGGTCCCAAAAATGCATTTGCCCTCAAACACCTTAAAAGCATAGTCATCTCTCAATGTGAAAAATTGGAAATAGTTTTCTCCACTTCTGTTTTAAGATGCTTATCGCAGTTGACTCATATAAGAATACATGATTGCAATGAGTTGAAGCATatcattgaagaagaagatgatgatattGAGAATGCAATGAGTTCAAAGACATGCTTCCCAGTGCTAAAAAACCTTATAGTATCAAACTGCAACAAGTTGAAAAGTGTGTTTCCGGTCTCAATGAGCAAAGAGCTTCCTGAATTAAAGGCTATGTTGATATGGGATGCATATGAGCTGGTagaaatattcaaaagtgtagGTGATGATGATCACAAAGTTGAGATTCCAAATCTGAAGGTTGTAGCATTTGTCAACCTACCAAACCTCTGCCATCTCCAGGGAATTCAGGGAGTACGAAATCATTTGGTACAGAATTGTAAAAAACTCTCTCTAACATCTAGCGGAGATTTTGGCAGTGACGTTTATGATACAGATGTCATAGAGGCTGATGTGCTTCAGTTGCTGACTTGTCTAAAATACAGGATGACATCTTCACAGTTGGAGGGTTCTATGTCTACCATTCCAGAAACAAGGAATGTGCCACCTATACATTCAGTTGATCTTAAACAAAAGggTATTCAGGTAAGCGTTGAAGAAGGAACTGCATCAACTAGTTACGCCAACACAATAACATCATCAACTCATTTAGAATCATTGGAGGGTTCTACATCAGAACAAACAGAAGCAGCAACCATGTTTACCACTTCAGAACTAAAGAATGAGGCAGATGGTATCAAGATAAGTGTTGAAGATGACACTACATCAGCTAATGCCATGACAGTAACATCATCCACTGATCATTCAAAATCAGTGAGTTCATCTTCACTGTTGGAGGGTTCAGAAAAAAATGTAGCAGCAAATTTGTCTTCCATTTCAGAAACAAAGAATGAGGAGCCACATGTACAATTAGTTGATCCTAAACAAAAGgGTGTTGAAGGTGTTGCTAAATTAACTAATGCCATGACAATAACATCATCAACTCATTCAGAATTAGTAAGTTCATCACAGGAACAAAATGTTGATGTCAAAGACTTTCAGGAAACTTCTAAGACCAATAATGATCAAGTTTCTCCAAATGACGACGCTTTCATGAATGTAAGCTCAATTATTGAAGAACAGTTTTCTAAGGATGATCCCTCTCCTAGCAATAGCCTTCCTTTGCCATTTTCATTCCAAACTCATTCAATGCCATTTGAAGGGAACCCTTCTCAAAAAGTGGAAGACCTAAGTCCTACTTCTATGTCAATTGCTATTACAGAGCCCCTTAGCACCAAAGATAGTGATGTCAAAGTTTTTCTAAATGATGGTGCTGTCGTAATTGAGGAACAATTCCCTAAGGATAATGTATTTAGAGTTTTAGAATCTAAGCCatcttcaaacaataaccttcCATTGCATCTTGAATTTGAAACTCCAATTCCTACTGAAgGGAAACAATCTCAAATAATGCAAAACTCAAGCTCTCCTTCCATTGTTCAGACTGTTGTTTGCTCTGCACTCTTTTTTCCTagtaaggtttttaacgaggcagaTGTTTTTCATTCTCTTGCTTATGTTCATTAG 5244 0.3499 MASLLTDLVKPHVEKLINGAITESSYICCFTCIAKDFEEEKARLEPEWTTFKQRVDVAKRKGEDVQDNALSWEEEAEKLIQEDTKTKEKCFFGLCCHCIWRYRRGKELANKKEQIKKLMETGKELAIGLPVRLPDVERYSSQYYIPFKSRESKYKELLDALNDEKNYIVGLQGMGGTGKTTLIRELGKELKQSKQFTQVVDTTVSFSPDIKKIQDDIAGPLGLKFDDCNESDRSKKLWSRLTKGEKILIILDDVWGDIDFDEIGIPHIDNHKGCRVFVTTRNMWVCNRLGCSKTIQLDLLSEEDAWIMFQSHAGLTKVSTKNLLDKGRKIAKECKSLPIAIAAIASSLKGEQRREEWDVALNSLKHISMRLRGVDKDLVDVYKCLKFSYDYLKDRNAEELFLLCSVFQEDEEITIKILTRLSIGVGLFGEGYDKYNNARNLLIVAKNKLLDSCLLLKTDEGDVKMHDLVREVAQWIASEEILVVNFSNKNQKSVVGRSNIKYLLFDGTPNDLCSPRFDGSKLKILILIMGTCCFGDSFFENIAGLRVLNLIADYQTIPLPQSIRLLTNIRSLLVESADLGDISVLGSLQSLETLDLNLCTIEELPQEIAKLKELRLLNFDDCTIESNNPFEVIQRCPSLEELYFEDSFNDFCQEITLPTLERYHLTQGYSKFYDSSLSKSVSLENDYLSEATFKYVMQTAEHLKLERIKKGWRNIMPEIVPIDEGMNDLIELHLKDDSQLRCLVDTEHIGCSQLPNVFSKLVVLKLFKMNNLEELCNGPISFDSMNSLEKLTIMSCGNLRSLFKGNLNLCNLKTVKIEECSKLVSVFHLSPSGSLPLLEVLNISGCHQLVNIFTNEKGVDDPIEEILLPKLKVVKIEECNELTYIFDQEVKLDSLIQLELEDVSNFIDIFPKSCDSNSKEETQLQLQEVEPMKSNILSCCYGYKSKGSTTNTKVPTETSSYCLNIWERAQCLSRLSHIICNIKVITLISVPNIKSVFVLSIAPKMLLKSLTITGCDELEHIVVDIGDGSGGNELGINVFPKLKELYVGSCKKLKYIFGHINASNDNDQNNNEIQLHLPALKSLKLSSLPSLIGICPKQYHTTFSPLKVLEFHNCSQDDVKSIGDFTFLTSISRYQDNTTVKQFSGNIEHFLALESLKVSQSNVETILCLNEKSEPEIDLGLQDIILRKLPMMIYPFVGPKNAFALKHLKSIVISQCEKLEIVFSTSVLRCLSQLTHIRIHDCNELKHIIEEEDDDIENAMSSKTCFPVLKNLIVSNCNKLKSVFPVSMSKELPELKAMLIWDAYELVEIFKSVGDDDHKVEIPNLKVVAFVNLPNLCHLQGIQGVRNHLVQNCKKLSLTSSGDFGSDVYDTDVIEADVLQLLTCLKYRMTSSQLEGSMSTIPETRNVPPIHSVDLKQKGIQVSVEEGTASTSYANTITSSTHLESLEGSTSEQTEAATMFTTSELKNEADGIKISVEDDTTSANAMTVTSSTDHSKSVSSSSLLEGSEKNVAANLSSISETKNEEPHVQLVDPKQKGVEGVAKLTNAMTITSSTHSELVSSSQEQNVDVKDFQETSKTNNDQVSPNDDAFMNVSSIIEEQFSKDDPSPSNSLPLPFSFQTHSMPFEGNPSQKVEDLSPTSMSIAITEPLSTKDSDVKVFLNDGAVVIEEQFPKDNVFRVLESKPSSNNNLPLHLEFETPIPTEGKQSQIMQNSSSPSIVQTVVCSALFFPSKVFNEADVFHSLAYVH 1747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00790 1747 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 55 911 - -
Tsu03g00790 1747 MobiDBLite consensus disorder prediction 1486 1508 - -
Tsu03g00790 1747 Gene3D - 134 296 IPR027417 -
Tsu03g00790 1747 Gene3D Ribonuclease Inhibitor 1076 1361 IPR032675 -
Tsu03g00790 1747 Gene3D Ribonuclease Inhibitor 726 935 IPR032675 -
Tsu03g00790 1747 PANTHER - 55 911 - -
Tsu03g00790 1747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 404 IPR027417 -
Tsu03g00790 1747 SUPERFAMILY L domain-like 964 1340 - -
Tsu03g00790 1747 Pfam NB-ARC domain 156 390 IPR002182 GO:0043531
Tsu03g00790 1747 PRINTS Disease resistance protein signature 833 849 - -
Tsu03g00790 1747 PRINTS Disease resistance protein signature 241 255 - -
Tsu03g00790 1747 PRINTS Disease resistance protein signature 334 348 - -
Tsu03g00790 1747 PRINTS Disease resistance protein signature 168 183 - -
Tsu03g00790 1747 Gene3D - 300 387 IPR042197 -
Tsu03g00790 1747 Coils Coil 62 82 - -
Tsu03g00790 1747 SUPERFAMILY L domain-like 464 909 - -
Tsu03g00790 1747 Gene3D - 388 475 IPR036388 -
Tsu03g00790 1747 Gene3D Ribonuclease Inhibitor 522 670 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00790 Tsu-Chr3 7189657 7200945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00790 169 511 WRKY Transcription Factor Family AT5G45050 23.184 2.22e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00790 - - mtr:MTR_3g062420 1626.3