Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00789 ATGTTGCTTCANTTTGGTGAAGCCATATGTGGAGAAATTGATACCATGGGGCCAATCACTGAATCAAGTTATATATGTTGCTTCACGTGCATTAATAAGGATTTTGAAGATGAAAAAGCTAGATTGGAAGAAGAAAGGACAACTTTCAAGCAGCGCATTGATGTGGCAAATAGAAGAGGGGAAGATGTTCAAGCTAATGCTCTTTTATGGGAGAAAGAAGCTGAAGAGCTCATTCAAGAAAacactaaaacaaaacaaaaatgttccTTCGGATTTTGTTGTCACTGCATATGGCGATATAGAAGGGGAAAAGAACTGACAAATAAGAAAGAGCAAatcaaaaaattgatggaaaCTGGAAAGGAACTTGCAATCGGGCTCCCGGCTCGTCTTCCAGATGTTGAACGTTACTCATCCCAATACTATATTCCTTTTAAAAGTAGGGAATCAAAATACAAAGAGCTTTTGGATGCACTGAAcgatgaaaaaaattatacagtCGGGCTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAATGGGCAAGGAACTTAAGCGGTCCAATCAATTTACTCATGTTATCGATACAACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGATGACTGTAATGAATCAGACCGATCCAAAAAACTATGGAGCAGATTAACCAAAGGTGAgaagattcttataatattggaTGATTTGTGGGGAGATATCGATTTTGATGAAATAGGGATTCCACACATTGACAATCACAAAGGTTGTAGAGTTTTTGTAACCACGCGCAATATGTGGGTGTGCAACAGACTAGGGTGCAGTAAGACAATCCAACTTGATCTCTTATCTGAAGAAGATGCATGGATCATGTTCCAAAGTCATGCTGGTCTAACCAaagtttcaacaaaaaatttgcTTGACAAGGGCCGTAAAATTGCAAATGAATGCAAAAGATTACCAGTTGCAATTGCTGCTATCGCCAGTAGTTTGAAGGGCGAACAAAGTCGAGAAAAGTGGGATGTGGCCTTAAATTCCTTGCAGAAACATATGTCCATTGACGGTGTTGATGAAGATTTGGTTGATATTTATAAATGTTTGAAGTTCAGCTATGATTATCTCAAGAACAAAAGCGCCAAGGAATTGTTCCTCTTATGTTCTGTATTCCAAGAAGATGAGAAAATCTCTATTGAAATTTTAACCAGACTTGGCATAGGAGTCGGCCTCTTTGGGGGAAGTTATGACAAATACAACAATGCTCGAAATCTAGTAGTTGTAGCAAAAGATAAACTACTTGATTCATGTTTACTgttgaagaaaaatgaaagagatGTAAAAATGCATGACTTGATTCGTGAAGTAGCCCAATGGATTGCAAACAAAGAGATTCTAGTAGTAGATTTTtctaacaataataaaaaatcattactTGGAAAGGATAACAATATcaaatatttgtcatttcatGGAAATCCAATGGATTTGTGTTCCACTGggtttgatggttctaaactgAAGATTCTGATTTTCATCATGGACAGAGGTTGCTTTGTGGACGTTCCAGtttcattctttgaaaatattgtAGGGCTTCGAGTTTTGAATTTAATAGCAGGTAAAAGAATTACTTTATCATTACCACAATCAATCCGGTCATTGACGAATATTCGTTCTCTATTAGTTGAAAGTGCTGACTTGGGTGACATCTCTGTTTTGGGAAGCCTTCAAAGTCTTGAGACACTTGATTTGAAATGGTGTGGAATTGAAGAACTTCCACAAGAAATTGCAGAATTGAAGGAATTTAGATTGTTGAACTTGGAACACTGTAGAATTGAAAGTAATAATCCATTTGAAGTTATCAAGAGATGCTCATCCCTTGAAGAATTGTACTTTGTGTGGAGTTTCAATGATTTTTGTCGGGAAATAACCTTCCCTGCATTGGAAAGGTATCATCTCACTGATTATCGTATAATTTGCGATTCTTCACCATCAAAATATGTGTCTCttgaaaattattatttgtcaGAAGCCACATTTAAGCATGTGATGCAAACAGCAGAGCATCTTAAGTTGGAAAGAATTAAGCAGGGATGGAGAAATATCATGCCTGAAATTGTTCCAATAGATGAAGGTATGAATGATCTAATTGAGCTTCATTTGATAGATGATTCACAACTACGGTGCCTCGTAGACACTGAGCATATTGGTTGTTCTCAATTACCAAATGTATTTTCCAAGTTGGTTGTCCTAGAGCTCTTACATATGAATAATTTGGAAGAATTATGCAATGGTCCCATCTCCCTTGACTCTATGAACAATTTAGAGAAACTAACTATCAGCGATTGTGGAAATTTGAGAAGTTTGTTCAAAGGCAATCTAAATCTCTGCAATCTAAAGACTGTGAGAATAGAAAGATGCTCCACATTAGTTTCTGTGTTTCATTTGTCAACTTCTGGAAGCCTGCCGCTGTTGGAAGAATTGAATATAAGTAGATGTGATCAATTGGAAAACATATTTACATGTGAAAGGAGAGTGGATGAAGAAATATTACTTCCAAAGCTTAAAGTTGTCATAATAAAATTCTGTGATAAGTTGACTTACATATTTGACCAACAAGTCAAACTGGATTCACTAATAGAATTGGACCTGAGACGTGTGTCAAATTTCATTGACATATTTCCAAAATCATGTGATTCCATTTCCAAGGCAGAAACACAATTGCAATTGCAGGAGGTGGAGCCAATGAAATCGAATATATTATCTTGTTGCTATGGATACAAATCGAAGGGTAGTACCACAAATACTAAAGTCCCCACGGAAACAAGTTCATATTGTCTTAACATATGGGAACGTGCTCAATGTCTTTCAAGACTATCACATATCATCTGCAATATTAAAGTGATCACATTGATAAGTGTTGCAAACATAAAATCAGTGTTTACGTTATCTATTGCACCAAAAATGTTATTGGAGAGCTTGACTATTAAATATTGTGATGAATTGGAGCACATAGTAGTAGACATTGGAGATGACAGTGGTGTAAATGAATTGGGCAATGTCTTCCCAAAATTAAAAGAGCTCAATGTTGAAGAATGCAAGAAATTGAAATACATATTTGGGCGCATTAATgataatgatcaaaacaacaatgaGATTCAACTTCATCTTCCAGAATTGAAAAGTCTCAAGCTCTCATGTCTCCCAAGTTTAATCGGCATTTGTCCCAAACAATATCACACAACATTTTCACCTTTGAAAGTACTTGAACTCGATTGTTGCTCTCTGGATGATGTTAAATCTATTGGTGATATTAACTTCCTTACTTCGATTTCAAAATACCAGGACAATACAACTGTCAAGCAATTCAGTGGGAACATAGAACATTTTCTAGCTTTGGAAAGTCTCAAGGCTATGTTGATAAGTGAAGCAGATGAGCTGGAAGAAATATTCAAAACTGTAGGTGATGATGATCACAAATTTGAGATTCCAAATCTGAAGGTTATAGCATTTGTCAACCTACCAAACCTCTGCCATGTCCAGGGAATTCAATTTCAGGGAGTACAAGATCGTTTTGTACAGAATTGTAAAAAACTCTCTCTGACTTCAATAAAATCTAACAGAGGTTTTGACCGTGACGCTTTTGAAATGGATGATTTTGATGTGTATCAGTTTCTGATTGGTCTAAACTACAGGATGACATCTTCACAGGGTATTCAGGTAAGCGTTGAAGAAGGAACTGCATCAACTAGTTACGCCAACACAATAACATCATCAACTCATTTAGAATCAGGTATCAAGATAAGTGTTGAAGATGACACTACATCAGCTAATGCCATGACAATAACATCATCCACTGATCATTCAAAATCAGTGAGTTCATCTTCACTGTTGGAGGGTTCTACTTCATCAGAAAAAAATGTAGCAGCAAATTTGTCTTCCATTTCAGAAACAAAGAATGAGGAGCCACATGGTGTTGAAGGTGGAGCTAAATTAACTAATGCCAGCACAATACCATCATCAACTCATTTAGAATTAGCAAGTTCATCACAGGAACAAGATGTTGATGTCAGAGACTCTCAGAAATCTGCTAAGACCAATAATGATCAAGTTTCTCTAAATGACGGTGCTTTCATGAAAGTAAGATCAATTATTGAAGAACAACTTCCTAAGGATGATCCCTCACCAAGCAATGTCCTTCCTTTGCCTTTTCGAGGGAACCCTTCTCAAAATGTGGAAAACTTGAGTTCTCCTTCTCTTGTCACGTGCGAGCTTGAGCAACTGGTCTCTAAGAAGCTTTTGGCTATTGAGAACTTGTCTTTGTTGACCGATTTTCTTGTTAAGCATCCTTCGGTTCTTTTATGGGACACTTCACTAAGTAATAGATACAAGGGTTATGCCTACAACTGTCTAGCAGAGCTATTAAAATTCCTCCAAACGCATAGTGTGTTGGATGTGTTAGGTTCAAGCCGCTCTGAATTTGTTGAGTTATTAAAAGATGTGCGCAAATGCGGTTTTGATAAGGATTGGTTGGATGGTGTCGAAAAGCACGCTTTGTTTCCTGATTTGGACTTCTCTCAAGATGCCTTGCAAAAACTATTGGACTCCCAACAACATGTCACCGAGGAAGTTGAAGCGATCAATTTGAAGTTGAACATTTTTTCTCAACATGTGGAAGATCTTAAGCATCATTTGACATCCTCTGAAGCCGTCTTGGAGAGTATCATTCAACAGAAAGCACAAGTTTTAGAAACTAAGGCTGCTTTAAGTGCTCCTCTTGGCTATTAA 4830 0.3559 MLLXFGEAICGEIDTMGPITESSYICCFTCINKDFEDEKARLEEERTTFKQRIDVANRRGEDVQANALLWEKEAEELIQENTKTKQKCSFGFCCHCIWRYRRGKELTNKKEQIKKLMETGKELAIGLPARLPDVERYSSQYYIPFKSRESKYKELLDALNDEKNYTVGLQGMGGTGKTTLAKEMGKELKRSNQFTHVIDTTVSFSPDIKKIQDDIAGPLGLKFDDCNESDRSKKLWSRLTKGEKILIILDDLWGDIDFDEIGIPHIDNHKGCRVFVTTRNMWVCNRLGCSKTIQLDLLSEEDAWIMFQSHAGLTKVSTKNLLDKGRKIANECKRLPVAIAAIASSLKGEQSREKWDVALNSLQKHMSIDGVDEDLVDIYKCLKFSYDYLKNKSAKELFLLCSVFQEDEKISIEILTRLGIGVGLFGGSYDKYNNARNLVVVAKDKLLDSCLLLKKNERDVKMHDLIREVAQWIANKEILVVDFSNNNKKSLLGKDNNIKYLSFHGNPMDLCSTGFDGSKLKILIFIMDRGCFVDVPVSFFENIVGLRVLNLIAGKRITLSLPQSIRSLTNIRSLLVESADLGDISVLGSLQSLETLDLKWCGIEELPQEIAELKEFRLLNLEHCRIESNNPFEVIKRCSSLEELYFVWSFNDFCREITFPALERYHLTDYRIICDSSPSKYVSLENYYLSEATFKHVMQTAEHLKLERIKQGWRNIMPEIVPIDEGMNDLIELHLIDDSQLRCLVDTEHIGCSQLPNVFSKLVVLELLHMNNLEELCNGPISLDSMNNLEKLTISDCGNLRSLFKGNLNLCNLKTVRIERCSTLVSVFHLSTSGSLPLLEELNISRCDQLENIFTCERRVDEEILLPKLKVVIIKFCDKLTYIFDQQVKLDSLIELDLRRVSNFIDIFPKSCDSISKAETQLQLQEVEPMKSNILSCCYGYKSKGSTTNTKVPTETSSYCLNIWERAQCLSRLSHIICNIKVITLISVANIKSVFTLSIAPKMLLESLTIKYCDELEHIVVDIGDDSGVNELGNVFPKLKELNVEECKKLKYIFGRINDNDQNNNEIQLHLPELKSLKLSCLPSLIGICPKQYHTTFSPLKVLELDCCSLDDVKSIGDINFLTSISKYQDNTTVKQFSGNIEHFLALESLKAMLISEADELEEIFKTVGDDDHKFEIPNLKVIAFVNLPNLCHVQGIQFQGVQDRFVQNCKKLSLTSIKSNRGFDRDAFEMDDFDVYQFLIGLNYRMTSSQGIQVSVEEGTASTSYANTITSSTHLESGIKISVEDDTTSANAMTITSSTDHSKSVSSSSLLEGSTSSEKNVAANLSSISETKNEEPHGVEGGAKLTNASTIPSSTHLELASSSQEQDVDVRDSQKSAKTNNDQVSLNDGAFMKVRSIIEEQLPKDDPSPSNVLPLPFRGNPSQNVENLSSPSLVTCELEQLVSKKLLAIENLSLLTDFLVKHPSVLLWDTSLSNRYKGYAYNCLAELLKFLQTHSVLDVLGSSRSEFVELLKDVRKCGFDKDWLDGVEKHALFPDLDFSQDALQKLLDSQQHVTEEVEAINLKLNIFSQHVEDLKHHLTSSEAVLESIIQQKAQVLETKAALSAPLGY 1609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00789 1609 MobiDBLite consensus disorder prediction 1347 1368 - -
Tsu03g00789 1609 Gene3D Ribonuclease Inhibitor 451 716 IPR032675 -
Tsu03g00789 1609 SUPERFAMILY L domain-like 461 905 - -
Tsu03g00789 1609 PRINTS Disease resistance protein signature 166 181 - -
Tsu03g00789 1609 PRINTS Disease resistance protein signature 332 346 - -
Tsu03g00789 1609 PRINTS Disease resistance protein signature 239 253 - -
Tsu03g00789 1609 PRINTS Disease resistance protein signature 588 604 - -
Tsu03g00789 1609 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 55 909 - -
Tsu03g00789 1609 Coils Coil 32 59 - -
Tsu03g00789 1609 Gene3D - 132 294 IPR027417 -
Tsu03g00789 1609 MobiDBLite consensus disorder prediction 1293 1386 - -
Tsu03g00789 1609 CDD AAA 152 278 - -
Tsu03g00789 1609 Pfam NB-ARC domain 153 387 IPR002182 GO:0043531
Tsu03g00789 1609 Coils Coil 67 87 - -
Tsu03g00789 1609 SUPERFAMILY RNI-like 979 1112 - -
Tsu03g00789 1609 PANTHER - 55 909 - -
Tsu03g00789 1609 Gene3D Ribonuclease Inhibitor 753 933 IPR032675 -
Tsu03g00789 1609 MobiDBLite consensus disorder prediction 1293 1333 - -
Tsu03g00789 1609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 401 IPR027417 -
Tsu03g00789 1609 Gene3D - 297 390 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00789 Tsu-Chr3 7170377 7180482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00789 167 575 WRKY Transcription Factor Family AT5G45050 23.908 6.35e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00789 - - mtr:MTR_3g062320 1336.63