Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu03g00788 | ATGGAGATATCGTTGTTGAAAATGCTTGTTGACAGCATATCCTCATTTTTGCATTTATCGTTTTCTGGAAACATGAATTCGGAACCAGTCTCAAAATATTACCAGAAGGCAGAGGAGATACTTAAGTTGTTGAAGCCGATCATTGATGCTTTTGCTAATTCCGAGCTAGTCTCTGACGAAGTGCTTAGTAAAACATCCGAAGAACTTGGTCACGCTGTTGATGAATTAAAGGAGCATGTTGAGAATTGGCACCTATTGTCTAGCAAAGTGTACTTTGTTATGCAAGTTGAACCCTTGATATCTAGGATTCGGACTTCGGGTCTCAAGGTCTTGCAGCAGCTGAAGGCTTCAAAGCAATTTCCCAATGATGAATTGAGTTCTGAACATTTGGAGGTAGAATATTCTATTAATTTAAGAGAGGTTCTGATTGAGGCTGTGGCTCTAGAAAAGTTGAAGGAGAATGCTGAACAGACTGAAAAGACTGcagaagctgaatacattgatCAAATTATTGCTGTTATAACGCGTATGCATGAGCGCCTCGTTATGCTCAAGCAAGCCCAGAGTTCCAGTCCTGTTTCAGTACCTGCTGATTTTTGTTGTCCTCTTTCTTTAGAGTTGATGACTGATCCGGTGATCGTGGCTTCAGGGCAAACTTATGAGCGGGCTTTTATCAAGAACTGGATTGATCTTGGTCTTACAGTTTGTCCAAAGACACATCAGACTCTGGCTCACACCAACCTAATACCTAACTACACTGTAAAGGCACTAATTGCAAACTGGTGTGAATCAAACAATGTGAAACTGGTTGATCCCACAAAGTCAACAACCTTAAATCAAGCATCGATCCTTCATGGGTATATGGAGTCTGGTACAACCAGGGAATCTCCTCTTTTTTCTCATTCGAGGAGTAACCTGCCATCCTCACCTGAGTCCGCTCGTTCTCGTTCTTTTAGTTCGCCAGGTAATAACATACCTTCTTCAGGTGGAATCCAGCGAGAGGCAACATCACCTGTGCACCCTCGTTCAATTTCAGAAGGTTCTTTGAGTGGCATAATTAATGGGCAATATATGGATGGTGCTAGAACATCACCCGCGGCTTTAGACGACAGGTCTGCTAGCTCAGATGCAAGCAGTATTGATTCAATTGGCCAACCATCAATATCACCATCTAGAAGAGAATCTTCCGGTGCCTTCAGCTCCGAACTATCTCAAAACCATGTTAGAGCTGTATCTGATTCTGGTGCATTTTCTGATGCAAATTATCAAGAAACACAAGGTGATGACAGCAATGCTTCTCAGCTGTCAACAAGTCCAGGCTACAGTAGAGACACTTCTGGCGAATTAAATCCAGGGCCAGATGCTGCTGGTTCTGCTCCTATGCCATCAACGCAGAGAGAACCCGAGTTCCCATCCCGATTGATGGAGGCAAGGTCTCGAAGCCAAGCTATATGGAGGAGGCCATCAGAAAGGCTTGTGCCTAGGATAATATCTTCTGCTGTTGAACCAAGAGTTGATCTTTCTGGTATTGAGGCACAGGTTCGGAGTTTAGTTGAGGGCTTGAGGAGCATTGATCTTGATATTAAGAGAGATGCAACTTCAGAAATCCGTCTTCTTGCTAAACACAATATGGATAATCGAATTGCAATTGCAAATTGTGGAGCCATTAACATATTAGTTGACTTACTCCAATCAGATGATTCAAGGATCCAGGAAAATGCTGTTACAGCACTTCTTAACTTATCAATCAATGATAACAACAAAACTGCAATTGCAAATGCCGGTGCAATTGAACCTCTGATTCATGTTCTTGAGAACGGGAGCCCAGAAGCGAAGGAAAATTCAGCTGCCACTCTTTTCAGCTTGTCGGTGATTGAGGAAAACAAAGTTAACATAGGGAGATCTGGGGCAATTAGACCACTTGTAGATTTATTAGGGAATGGAACTCCGAGGGGAAAAAAGGATGCTGCCACTGCTTTGtttaatttgtcaatatttCACGAGAACAAGAATCGGATTGTGCAAGCTGGCGCCGTAAAACACCTTGTGGAGTTGATGGACCCAGCGGCTGGAATGGTTGACAAGGCTGTGGCTGTCTTAGCAAACCTTGCGACAATTCCAGAAGGAAGAATTGCAATCGGACAGGAAGGTGGGATTCCTGTTCTAGTTGAAGTTGTTGAGTTGGGTTCTGCTAGAGGAAAGGAGAATGCAGCAGCAGCTCTTCTACATCTTTGCTTACACAGTAGTAGATTCTTAAGCATGGTGCTCCAACACGGAGCCGTACCACCATTAGTAGCTTTATCACAGTCAGGCACACCAAGAGCCAAAGAAAAGGCCCAAGCTCTCCTTAATCAATTTAGAAGTCAAAGACATGGGAATTCTGGGAGGGGCTGA | 2394 | 0.4307 | MEISLLKMLVDSISSFLHLSFSGNMNSEPVSKYYQKAEEILKLLKPIIDAFANSELVSDEVLSKTSEELGHAVDELKEHVENWHLLSSKVYFVMQVEPLISRIRTSGLKVLQQLKASKQFPNDELSSEHLEVEYSINLREVLIEAVALEKLKENAEQTEKTAEAEYIDQIIAVITRMHERLVMLKQAQSSSPVSVPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTHQTLAHTNLIPNYTVKALIANWCESNNVKLVDPTKSTTLNQASILHGYMESGTTRESPLFSHSRSNLPSSPESARSRSFSSPGNNIPSSGGIQREATSPVHPRSISEGSLSGIINGQYMDGARTSPAALDDRSASSDASSIDSIGQPSISPSRRESSGAFSSELSQNHVRAVSDSGAFSDANYQETQGDDSNASQLSTSPGYSRDTSGELNPGPDAAGSAPMPSTQREPEFPSRLMEARSRSQAIWRRPSERLVPRIISSAVEPRVDLSGIEAQVRSLVEGLRSIDLDIKRDATSEIRLLAKHNMDNRIAIANCGAINILVDLLQSDDSRIQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLENGSPEAKENSAATLFSLSVIEENKVNIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKNRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGRIAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCLHSSRFLSMVLQHGAVPPLVALSQSGTPRAKEKAQALLNQFRSQRHGNSGRG | 797 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu03g00788 | 797 | MobiDBLite | consensus disorder prediction | 419 | 475 | - | - | |
| Tsu03g00788 | 797 | MobiDBLite | consensus disorder prediction | 368 | 405 | - | - | |
| Tsu03g00788 | 797 | SUPERFAMILY | RING/U-box | 185 | 272 | - | - | |
| Tsu03g00788 | 797 | Coils | Coil | 138 | 168 | - | - | |
| Tsu03g00788 | 797 | MobiDBLite | consensus disorder prediction | 293 | 405 | - | - | |
| Tsu03g00788 | 797 | Pfam | Armadillo/beta-catenin-like repeat | 584 | 623 | IPR000225 | GO:0005515 | |
| Tsu03g00788 | 797 | Pfam | Armadillo/beta-catenin-like repeat | 627 | 664 | IPR000225 | GO:0005515 | |
| Tsu03g00788 | 797 | Pfam | Armadillo/beta-catenin-like repeat | 545 | 582 | IPR000225 | GO:0005515 | |
| Tsu03g00788 | 797 | ProSiteProfiles | U-box domain profile. | 194 | 268 | IPR003613 | GO:0004842|GO:0016567 | |
| Tsu03g00788 | 797 | SMART | Ubox_2 | 198 | 261 | IPR003613 | GO:0004842|GO:0016567 |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu03g00788 | - | - | gmx:100811250 | 1207.2 |
Showing 1 to 1 of 1 entries