Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00786 ATGGATAGTTCAAATAATATGCTGGCTTGTGGTAGTATTCATGATGAAGTTATGAAAGTTGACaaaattaatgatgatgatgcatGTTGGGAGCCTGCAACGGGGATGTGTTTTTCTTGTTTAGATGAAGTTAAATCTTTTTATGGAGAGTATGCTTTGAAAAAGGGTTTTCGGTGGAAGATTAGAACATCAAGAAAAGGACCCGACGGAGAAATATGCTACTTAATTCTAGCATGCTCAAGAGAGGGGTCTAAAGCCTCAAAGGTTTCGTGTACATTGAAGACACTTCCTGAAAAGGTGAAAAGTTGTCCTGCTAAGATTTGTATTAAGTTGGAAGAAGATGGATTGTGGTACATTAGAAAATTTGAATCTGACCATTCTCATGAGACCAGCCCTACAAAGGCAAGGTTGTTTAAGGCTAACAAGAAAATGAACTTGCATGTAAAGAGGACTATCCAAGTCAATGATGATGTAGGAGTGAGGATCAAAAAAACTTTTCAATCTCCTGTTAAAGATGCAGGAGAGCATGGAAATATACCATTTTGTGATAAAGACATGAGGAATTATGTTAACAAGGAAAGGTGTGCAATTGGAAAAGAAGGTGATGTTAAGGCATTGATAAGCTATTTTTGTCAAATGAGggaacaaaattcaaatttcttcTACGACATGGATTTGGATgtaaaaaatgtgttttgggCTGATGCAAGAAGTAGAGCTACTTATGAGTATTTTGGAGATGTTGTAACTTTAGACACAACATACTTAACCAATAAACACGACATGCTTTTTTTGGCATTTGTTGGTGTGAATCATCATGGTCAATCAACATTACTTGGATGCGGGCTGCTTTCAGGAGAAGAAACAGAATCATATGTATGGCTATTCAAAACTTGGCTTCGTTGTATGCTAGGAAAGGCCCCTATCGGTATTGTGACTGATCAATGTAAGACTATGCAAAATGCCATTGAGTTAGTCTTCCCTACAACACGCCATAGGTGGTGTTTATGGcatataatgaaaaaaattccCGAAAAGCTCAGCAGATATGATGAATATAAAAGGATCAAGTCTGCGATGAAAGAAGCAGTTTATGATACATTCACAACAAATGATTTTGAAGAGAAGTGGTGTTCCTTCATCGACAAATTTGAGCTTCAACATAATGATTGGTTGAGTGGATTGTATAACGAGCGTCATAAATGGACACCAACCTTcgtaagaaaatatttttgggcaGGTATGTCAACTACACAACGAAGTGAGAGCATACATGCTTTCTTTGATGGATATATTGATTCAACAACAAGTCTAAATCAATTTGTAAAGCAATATGATAATGCTCTTAGAAGTCGAGCAatagaagaatttgaagcaGATTTTAATTCAATGGATACTACAATTCCGTGTGGGTCAAACTCTTCCATTGAAAAGCAATTCCAAGGTGAGTACACCCATGCCAAATTCAAGGAAGTTCAAGCTGAATTCAGATCTAAAATGAATTGTGCTGCCTCGTTGAATGTTCTGGAGGGTTGTTTTGCTACTTATCATGTGTTGGAGGAGGTGGTAGTTGGAGACATACCTAAAGAACGTGTCTTAAATGTTGTGTTTAATCAGGAAAGCCATGATTTCAATTGTGAATGCTCGTTGTTTGAGTTTAGAGGCATCTTGTGTTGCCATGTGTTATCTGTGTGTGCTCAAGAGAGGATTAAAAATGTGCCAGAGAAATATGTTTTAACAAGATggaataaaaatatcaaaaggaagcaTTCATTTATTAAGAGCAGTTATGGCGGGACAGAATTGAAGCCACAAATGGTTAGATTTGAAAAATTGTGCAAGCATTTCTATGATATTGCTGAAGTAGCTGCAAAGTCCGAAGATGGAACTAAGGCACTCCATGAAACATTAAATCAATTTAATTCTAATTTGCCCACCATGGATGGTACAACTAACAAACACGAAGATGAAACATACAATGATATGAAATGA 1992 0.3454 MDSSNNMLACGSIHDEVMKVDKINDDDACWEPATGMCFSCLDEVKSFYGEYALKKGFRWKIRTSRKGPDGEICYLILACSREGSKASKVSCTLKTLPEKVKSCPAKICIKLEEDGLWYIRKFESDHSHETSPTKARLFKANKKMNLHVKRTIQVNDDVGVRIKKTFQSPVKDAGEHGNIPFCDKDMRNYVNKERCAIGKEGDVKALISYFCQMREQNSNFFYDMDLDVKNVFWADARSRATYEYFGDVVTLDTTYLTNKHDMLFLAFVGVNHHGQSTLLGCGLLSGEETESYVWLFKTWLRCMLGKAPIGIVTDQCKTMQNAIELVFPTTRHRWCLWHIMKKIPEKLSRYDEYKRIKSAMKEAVYDTFTTNDFEEKWCSFIDKFELQHNDWLSGLYNERHKWTPTFVRKYFWAGMSTTQRSESIHAFFDGYIDSTTSLNQFVKQYDNALRSRAIEEFEADFNSMDTTIPCGSNSSIEKQFQGEYTHAKFKEVQAEFRSKMNCAASLNVLEGCFATYHVLEEVVVGDIPKERVLNVVFNQESHDFNCECSLFEFRGILCCHVLSVCAQERIKNVPEKYVLTRWNKNIKRKHSFIKSSYGGTELKPQMVRFEKLCKHFYDIAEVAAKSEDGTKALHETLNQFNSNLPTMDGTTNKHEDETYNDMK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00786 663 ProSiteProfiles Zinc finger SWIM-type profile. 531 569 IPR007527 GO:0008270
Tsu03g00786 663 Pfam FAR1 DNA-binding domain 46 130 IPR004330 -
Tsu03g00786 663 PANTHER OS03G0843700 PROTEIN 19 643 - -
Tsu03g00786 663 Pfam MULE transposase domain 248 342 IPR018289 -
Tsu03g00786 663 MobiDBLite consensus disorder prediction 643 663 - -
Tsu03g00786 663 SMART 26again6 544 571 IPR006564 GO:0008270
Tsu03g00786 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 643 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00786 Tsu-Chr3 7149730 7152341 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu03g00786 MULE 7.4e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00786 - - gmx:102667848 754.592