Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00784 ATGGAGAATGATATGAAACCGAATGTGTTAATGGAGAAATATGAGTTAGGGAGGTTACTTGGTCAAGGAACGTTTGGAAAGGTTTACTATGCACGGAGTAAGGTAACTAACCAAAGTGTTGCCATTAAAGCGATTGACAAAGATAAGGTTATGAGAACTGGTCAAGTTGATCGAATCAAGCGTGAAATATATGTTATGAAATTGGCTAGACATCCGAATATTATACAGCTTTTCGAGGTTATGGCAACTAAGAGTAAGATTTACTTTGTTATCGAGTATGCTAAAGGTGGTGAGCTTTTCGACAAAGTGTCTAAAGGAAGACTCAAAGAAGAAGTTGCACACAGATATTTTAAGCAGTTAATTAATGCGGTCGATTTTTGTCACAGTAGAGGCGTGTATCATCGAGACATTAAGCCTGAAAACATTCTATTGGATGAAAATGGCAATCTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTTGTGGAATTAAATCAACAGGATATGATTCTCCGTACGCCTTGTGGCACTCCGGCCTATGTTGCTCCGGAAGTCATTAAAAGGAAAGGGTATGATGGTGCGAAAGCCGATATTTGGTCTTGTGGAATAGTTCTATTTGTTTTATTGGCAGGTTATCTTCCTTTTCATGACTCGAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGTCCGAGTTGGTTACGACCGGAAGTGTGCACGCTATTAAGCGAAATATTAGATCCAAAACCCGACACTAGGATTTCCATAGAAAAGATTAAGGAACatatttggtttaaaaatgGACCaaatgttagaaataaaaaaccaaaagtgGAAAATAGCAGTGTCTCTTCATCAGGTACAGTTGTTTCTGATCAAAGTAATGAAAACAGCAGTCCAGAAGCTGAAGCAAAGGAAGAGTCGGTCGTGCCGATCAGTCTAAATGCCTTTGATATCATCTCCCTTTCGGCTAGTTTTGATCTTTCTAGATTCTTTAAAGAGGATGTTCAGAAAAAAGAAGCGAGATTTAGTTCGAAACTACCTGCATCGGTCATTATCTCGAAGATGGAAGACATTGCTAAGCAACTGAGgatgaaaataaagaaaaaagctGCTGGTTTGTTGAAATTAGAGGGAGTCGATGAAGGTAGGAAAGGGGTTTTATCTATTGATGCAAAGATCTTTGAGGTTACTCCTAATTTCCATTTAGTTGAGGTGAAAAAATCGAATGGAGATACGTTGGAATATCAGAAAATATTGAAAGAGGATATTAGGCCAGGTCTTCAGGATATTGTTTGGGTGTGGCAAACTGACCAACAACTGCAATCACAACAATCAGATCAAGAGCTACCGATACATGATCAGCCGCAACAACAACCACAGCCATAA 1398 0.3727 MENDMKPNVLMEKYELGRLLGQGTFGKVYYARSKVTNQSVAIKAIDKDKVMRTGQVDRIKREIYVMKLARHPNIIQLFEVMATKSKIYFVIEYAKGGELFDKVSKGRLKEEVAHRYFKQLINAVDFCHSRGVYHRDIKPENILLDENGNLKVSDFGLSALVELNQQDMILRTPCGTPAYVAPEVIKRKGYDGAKADIWSCGIVLFVLLAGYLPFHDSNLIEMYRKISKAELKCPSWLRPEVCTLLSEILDPKPDTRISIEKIKEHIWFKNGPNVRNKKPKVENSSVSSSGTVVSDQSNENSSPEAEAKEESVVPISLNAFDIISLSASFDLSRFFKEDVQKKEARFSSKLPASVIISKMEDIAKQLRMKIKKKAAGLLKLEGVDEGRKGVLSIDAKIFEVTPNFHLVEVKKSNGDTLEYQKILKEDIRPGLQDIVWVWQTDQQLQSQQSDQELPIHDQPQQQPQP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00784 465 PANTHER - 5 454 - -
Tsu03g00784 465 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Tsu03g00784 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Tsu03g00784 465 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 454 - -
Tsu03g00784 465 MobiDBLite consensus disorder prediction 277 308 - -
Tsu03g00784 465 ProSiteProfiles Protein kinase domain profile. 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00784 465 SUPERFAMILY Protein kinase-like (PK-like) 10 302 IPR011009 -
Tsu03g00784 465 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Tsu03g00784 465 SMART serkin_6 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00784 465 Gene3D Transferase(Phosphotransferase) domain 1 101 314 - -
Tsu03g00784 465 CDD CIPK_C 318 432 - -
Tsu03g00784 465 MobiDBLite consensus disorder prediction 277 301 - -
Tsu03g00784 465 Pfam Protein kinase domain 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00784 465 Gene3D Phosphorylase Kinase; domain 1 8 100 - -
Tsu03g00784 465 Gene3D Kinase associated domain 1, KA1 315 437 - -
Tsu03g00784 465 Pfam NAF domain 314 372 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00784 Tsu-Chr3 7136311 7138994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00784 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 63.436 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu03g00784 Pkinase 8.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00784 - - gmx:100790905 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00784 03 7136311 7138994 Tsu03g00784 03 7136311 7138994 ECH
Tsu05g02989 05 40231889 40233283 Tsu03g00784 03 7136311 7138994 ECH
Tsu04g01522 04 15941741 15945359 Tsu03g00784 03 7136311 7138994 ECH
Tsu06g00758 06 6763209 6764567 Tsu03g00784 03 7136311 7138994 ECH
Tsu03g00784 03 7136311 7138994 Tsu05g02989 05 40231889 40233283 PCT