Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00780 ATGGCGAGTCTTCTGTGTGGCCTAGCGAAGCAATATGTGGAAAGATCGATAAATCAGGCAATAACTGAAGCCCGTCATGTATTTTGCTTTACATGCATTGTTAATGAATTCGAAGAAGAAAGGGCTAGGTTGGAACCAGAAAGGATAACTATGGGGCAACGCGTCAAAGTGGCAATAGGAAGAGATAAAGATATCAAAGCTAATGTTGGTTTTTgggaagaagaaattgacaggCTCAATAAACTGGacaccaaaacaaaagaaacatgtttttttggattttgtcctgATTGTGTGTGGCgatataaaaaaggaaaagagtTGGCAACTAACATGGAGCAGATCAGGCAACTAAAAGAAAAGGCAGACAAACTTGAAAATATTGAACTCCCTCGTCGTCTTCCAGATGTTGAGCGTTATTCATCCCAAGATTACATTTCTTTTAAAAGCAGAGTGTCAATATACAAAGAACTATTGGATGCACTAAAAGACGACAGCAACTATANAAAAGAGTTGGCAACTAACATGGAGCAGATCAGGCAACTAAAAGAAAAGGCAGACAAACTTGAAAATATTGAACTCCCTCGTCGTCTTCCAGATGTTGAGCGTTATTCATCCCAAGATTACATTTCTTTTAAAAGCAGAGTGTCAATATACAAAGAACTATTGGATGCACTAAAAGACGACAGCAACTATATAACTGGATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCAAAGAAGTGGGCAAAGAACTAAAGCAATCTGAACAATTCTCCCATGTAATTGATACGACAGTGTCACTTcctgatataaaaaaaattcaagatgaTATTGCCGGACCTTTGGGATTGAAATGGGAGGGTTGTAACGAATCAGACCGACCCAAAAAACTATGGAGCAGATTAACAAATGGTGAGAAAATTCTTTTGATCATGGATGATGTGTGGGATCGAGACCCACCTCTTGATTTTGATGCAATAGGGATTCCAAAGTGGGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCACGTAGTAAacaaatattcaataaaatggGTTGTGATAAGAGAATTGAAGTGGAGCTTTTATCAGAAGAAGATGCATGGATCATGTTCACAAAGTATGCCGGTATATGCAGTCACTCCTCAAAGAATGTGATTGCTAAGGGACGTAAAATTGCAAAGGAATGCAAAGAATTACCTGTTGCAATTGCAGTTATTGCAAGAAGTTTGAAGGGCCAACAACATCGGGAGCATGAGTGGGATGTGACATTAAAATCCTTGAAGAAGCCTGTATCCATGCATGGTGTTGATGACAATGTGGCTCAAATTTATAAATGTTTGCAGTTTAGCTATGATTATATGAAGGATGAGAAAGCTAAGAGATTGTTCCTCTTATGTTCTGTATTccgagaagatgaagaaatttcTATTGAAGTTCTAACCAGACTTTGCATAGGAGCGGGTATTTTTGGGGGAGATTATGGCAGCTATGATGATGGTCGAAACCAAGTAGTTGTAGCCAAAAATAAACTCCTAGATTCTTGTTTGTTGTTGGAGGTCGgcgaaaaaaatgtaaaaatgcaTGATTTGGTTCGTGATGTGGCTCATTGGATAGCGAACAACGAGATTCAATTGGTAAATTTGTCTGACAAAAACCAAAAGTCATTGGTTGAAAAGGAGAccaatattaaatatttattttgtgaaGGGAAGGACAAAGATTTGTTTTCCTGTAAGTTTGATGGTTCCAAACTTGAGACTCTAATTGCCAAAGTGGATGGAAATGAAGACCTCGAATGCATGGAAGTCCCAAATTCTTTCTTTGAAAATCTTGTCAAGCTTCGAGTTTTGCATATTTTAGGTAATGATCATCAACCTCTATCATTACCACATTCAATTCAATCATTGACAAATATTCGTTCTGTGAGGATTGAAAAAGGTGATTTAGGTGACATCTCTGCTTTGGAAAACTTGCAAAGTCTTGAAACTCTTGATCTGGTTATGTGCAACATAAATGAATTACCAAGAGAAATTGCAAAATTCAAGAAATTTAAATTGTTGAACTTGGAAAAATGTTCCATTGGAAGGAATAATCCATTTGAAGTTATTGAAAGATGTTCATCACTTGAGGAGTTGTATTTCATAAACAGTTTTAATGGTGTTTGTCGAGAAATAAACTTACCTGAGTTACAAAGATATCAAATCTGTAATGTGATGTCGGTTCTAATGAATTGTTCACTATCAAAATGGGTTCATTTGTTTGGTGATAAAGCTTCGTTTTCAAAAGGAACACTCAAATATATTCTGCAAACAACAGAGATTTTTTCACTAAATAGTATCAAGGGGACATGGAGAAATCTTATGCCTGAGATTGTTCCAATAGATCTAGGTATGAATGATCTCGTTGATCTTTCTTTGACTTGTGTTCCGCAATTGCAGTGCCTCATTGACACCATTGGTTCTCAATTCCCAAATGTATTGCCCAAGTTGGTTCAACTAGAACTGAGAGAAATGGAAGATTTGGTAGAACTATTCAAAGGTCCCATTTCCTTTGACTCTTTGGAGAGTTTAGAGAAGCTATCAATCGACGATTGTAAAAAGTTTCAAAGATTGTTTAATTGCAAGTTAAACCTCTGCAATCTAAACACCATGAGACTGTACAAATGTCCGATGTTAGTGTCCCTATTTAAACAGTTGTCTTTTCAAAGTCTGGTGCTACTAGAGACATTGGAAATATCTTATTGTGAGAGACTGAAAAAGATAATACCAGATGAAAGAAGAGAGGAGGAATCAAGAGGAGAAATAGACGACGgtgataataataacaaatgtCTTGGCTCAAGGTTTCCAAAACTAAAAGTTCTTGATATTCTGGGATGCCCCCTATTAGAATCTATATTTCCTTTTCTCTCTGTTCAAGACCTTCCAGTACTACAAAAAATCAGAATTAGAAGATGTGATGGATTGAAATACATATTTGGCCAATACCAACATGCAGAATTTGGTTCACTAAGACAATTGGAGCTCTGTCAATTACCAAATTTCATTACTATGTTCCGTGAATCTAATCATCCAATATCTTCGTCTGAGAAGGGGTCATCTTCCACGTCCAATTATGGTTCGAAGGAGCAAATACAATTGGATCCCTTGAAATCCAATATCTTCTCTTGGACTCAAATATGTTGTCATGGAAATAAATATAGACACAAACCCGCGAAAGGGTCATCTTCCAGAATTCCACTGGTTGATGGGGATCAACCGCAAGATTACATAATTACATTGCAGGAATCAAATTCATATTGGCTTTACATGTGGGAACGTGTTCAATGTCTTCCAATACAATCAAATATCTTGTGCAACATTACAAAGATTGAATTCTCTCACTTTTCGAAGATAAAATCAGTATTTATTCTGTCTATTGCTCCAATGATGTTGTTGGAAACTTTGATAATTTCGAACTGTGATGAACTGAAGCATATAATAATAGACACCGGAGATCATAAGAGTGGTGGCAATGTAGTCTTCTCAAAATTGAAAGATCTCCAAGTTTATAATTGCGTGCAATTGGAATACATAATTGGACACTACGATCAAAACCATACTCATATTCACCTTCATTTTCCAGCATTGAAACATCTCTTTCTTCAGAATCTTCCAAGTTTAGTGGCCATATGTCCCAAACATTATACCACAACATTTCCACTTTTGGCAGACCTTCGACTCCGTGACAGCTTACAGGTTGCTAACAAATCTGTCGGTGATTTCATACTTCACGGGGCTTCAGAATTTCTAGACAGTACAATCATGAAGGAATTGAGTGGCAACACAGAGCATTTTCTATCTGTGGAAAGGCTTCAGATAGAAAACTCCAAAGTAGAAAGTATCTTCTGTCTCAATGAGGTAAATGAACAGAAGATGAACTTGGGATTGTATAACATTGTGTTGCAGGATCTGCCTGTGATGACGCGTCTTTTTGTCGGTCCCAAAAATTCATTTGAGCTCAAAAACCTTGCAAGGATAAAACTTCCTGAGCTAAAGGTTCTGTTCATAGGAGAAGCTGATGAGATAGAGGAAATATTTAAAAGTGAAGGTGAGGGAATTCAGAAAGTTGAGATTCCAAATCTGAAAATCGTAGCATTTGTCAACCTACCAAGCCTCTGCTATTCTCAGGGAATTCAATTTCACGCTGTAAATTCCCGTTTTATACAGAATTGTCAAAAACTCTATCTGACATCTACATCAACAACCTGCTATGTCTCTGAGGTTTACGGTTTAGGTTTCAACATAgATTATGATTTCTATGGGGATTTAGATAATCTATTCCAACAAATACAAGAAGAGTCTCGAGGTCACAATGCCAGTAATGAATATCTACCAAGTTTGGAAGCCGAAGATTTTGTAGCTGAGATTGAAGTTCAAGTAACATCAGGAAACATGTTGACTTCTTCACAGGAATATGGTGACGACCAAATAGGCATACATTCTTTTTCAATTTCCACTACAGAGACAATTACAGACGAAGATTTTGAGATTAATAACGATCAAGGTGAAGATGTTTTGgatcaattttcttttcttatgtTACCTGCATCAGTCATCACCCGTATGATTTTGAACACACTTCTTTTCCGCACATTGTTCAGCTCAACTATGGAGGAACAATTTTCAAATGATGATGAAATAATAGTTTCGAAATCAAGAGTCTATTCTATTGCATCTCAATTTCCTTCAATACCTTCTAAAGCTTTTCCAAATGGGACTGAAGTTGAATCCTCATCTGGACATGAGTTAACTTTTTCACATGGAAATGGCATCGAGTCAAACATTCCTGGTTTAGAgacaaaaatgaaacaaaaagcAGCAAAGGGAAAGCAAGAATTTGTTGTAAAGATTAATGGTTTATGGATACCTTCAGTAGAAAATTCAGAAGATTTGTTGAATGAACAATCAATGAGTCAACAATGTTTGACGGATCAACAACATCCACTTGGAGAAGTTGATACTACCGTCAAACTTTCTCTGGTAAATAATTTGGAGGGTTCTACATCAGAAAAAACAGCTACATCAGCAGAAACTATGTCTACCGATTCAAAAACAAAGAATGAGGCAGATACACAATTATATGCTCCTAAACAAAAGGCATTATTTCCTCTATTTTGCTTGCATTCTTTTTTAAATCTTGAAGATGTAACTACATTAGTTCCTAATGCCAAGACAGTAACATCATCAACTCATTCAGAACAGATCATTTCATCATCAGGGCCATTAGTTATTAATGACCATAATCCATCTTCACATGAAGATGGTGATGACCAAATTGCCATGACTTCTTTTTCTATTGCCACTACAGAGACCAATGATCAAGGTAAAAATGCattgaatatgttttttatattcttaTGTTACTTCAAAATTCACCACccttttgattttgaactttttttgtTATCGCACAATTTGTTCAGCTATGCATTGAAATTGGAAATGCTGCGTCAATTTGACTACGACTTACAAAATGAGTGGGATTTAGAAACAACTGAAGATTTTGCAGCTGAGGTTGAAGTTCAAGCAACATCAGGACACATGTTGATTTCTTCACAGGTGTTGATGAATGGAGAATCAACGAGTCAACAGTGTTTGCTGGATCAACTTAGAGAAGTTGATACTGCCGTCACATCTTCTCAGGTAAATAATTTGGAGAGTTCAACGACAGAAAAAACATCAGCGGCAACTTTGTCCGCCACTTCAGAAACAAAGAATGGACCCTCTCAGGGTATTGAGATAaatgttgaagaagaagaaggaaccACATCAACTAATGCCAAGACAATAGCATCATCAGGCCAATTAGTTACTTCTGAGTGTAAAACAGCATCACAGGAAGATGGTGATAGCCAAATAGCGATGACTTCTTTTTCTATTGCCACCACAGAGACCAACGATCAAGTTTCTCTAAATGATGATGCTTTCATGAAAGGAAGCTGCTCAAATGTTGAGGAACAGTTTCCTAAAGATGATAAAATATTAGTTTCGAGATCAAGACTCTTTTCTACTGCATCTCAGTTTCTTTCGACGCCTTCTAAAGGGGACGCTTATGAAATAGTAGAAGATTTAAGTTCATCTTTTCTTGTCAAGAGGGAGCTTGAGCAACTGGTCTCCAAGAATCATTTGGATTATGAGAACTTGTCTTTTTTGACTGATTTCCTTGTTAAGCATCCTTCCGTTCTTTTAAGGGACACTTCACTTAGTAACAGATACAAGGGTTATGCCTACAACTGTCTTTCTGAGCTATTGAAATTCCTCCAAACGCATAGTGTGTTGGATGTGTTAGAAAAGCGCGCTTTGTTTCTTGGCTTACAAGTCTCTCAAGCTGCATTGAAAAAATTGTTGAactcaaaatatatattgactCAACATGTGGAGGATCTTAAGCATCAATTGACTTCTTCTGAAACTATTTTAGAGAGTATCATTCAACAAGAGGCACTAATTTTAGAAACTCAGGCTGCTTTAAGTGATCCTATTGGCTATTAG 6549 0.3533 MASLLCGLAKQYVERSINQAITEARHVFCFTCIVNEFEEERARLEPERITMGQRVKVAIGRDKDIKANVGFWEEEIDRLNKLDTKTKETCFFGFCPDCVWRYKKGKELATNMEQIRQLKEKADKLENIELPRRLPDVERYSSQDYISFKSRVSIYKELLDALKDDSNYXKELATNMEQIRQLKEKADKLENIELPRRLPDVERYSSQDYISFKSRVSIYKELLDALKDDSNYITGLQGMGGTGKTTLAKEVGKELKQSEQFSHVIDTTVSLPDIKKIQDDIAGPLGLKWEGCNESDRPKKLWSRLTNGEKILLIMDDVWDRDPPLDFDAIGIPKWDNHKGCRVLVTSRSKQIFNKMGCDKRIEVELLSEEDAWIMFTKYAGICSHSSKNVIAKGRKIAKECKELPVAIAVIARSLKGQQHREHEWDVTLKSLKKPVSMHGVDDNVAQIYKCLQFSYDYMKDEKAKRLFLLCSVFREDEEISIEVLTRLCIGAGIFGGDYGSYDDGRNQVVVAKNKLLDSCLLLEVGEKNVKMHDLVRDVAHWIANNEIQLVNLSDKNQKSLVEKETNIKYLFCEGKDKDLFSCKFDGSKLETLIAKVDGNEDLECMEVPNSFFENLVKLRVLHILGNDHQPLSLPHSIQSLTNIRSVRIEKGDLGDISALENLQSLETLDLVMCNINELPREIAKFKKFKLLNLEKCSIGRNNPFEVIERCSSLEELYFINSFNGVCREINLPELQRYQICNVMSVLMNCSLSKWVHLFGDKASFSKGTLKYILQTTEIFSLNSIKGTWRNLMPEIVPIDLGMNDLVDLSLTCVPQLQCLIDTIGSQFPNVLPKLVQLELREMEDLVELFKGPISFDSLESLEKLSIDDCKKFQRLFNCKLNLCNLNTMRLYKCPMLVSLFKQLSFQSLVLLETLEISYCERLKKIIPDERREEESRGEIDDGDNNNKCLGSRFPKLKVLDILGCPLLESIFPFLSVQDLPVLQKIRIRRCDGLKYIFGQYQHAEFGSLRQLELCQLPNFITMFRESNHPISSSEKGSSSTSNYGSKEQIQLDPLKSNIFSWTQICCHGNKYRHKPAKGSSSRIPLVDGDQPQDYIITLQESNSYWLYMWERVQCLPIQSNILCNITKIEFSHFSKIKSVFILSIAPMMLLETLIISNCDELKHIIIDTGDHKSGGNVVFSKLKDLQVYNCVQLEYIIGHYDQNHTHIHLHFPALKHLFLQNLPSLVAICPKHYTTTFPLLADLRLRDSLQVANKSVGDFILHGASEFLDSTIMKELSGNTEHFLSVERLQIENSKVESIFCLNEVNEQKMNLGLYNIVLQDLPVMTRLFVGPKNSFELKNLARIKLPELKVLFIGEADEIEEIFKSEGEGIQKVEIPNLKIVAFVNLPSLCYSQGIQFHAVNSRFIQNCQKLYLTSTSTTCYVSEVYGLGFNIDYDFYGDLDNLFQQIQEESRGHNASNEYLPSLEAEDFVAEIEVQVTSGNMLTSSQEYGDDQIGIHSFSISTTETITDEDFEINNDQGEDVLDQFSFLMLPASVITRMILNTLLFRTLFSSTMEEQFSNDDEIIVSKSRVYSIASQFPSIPSKAFPNGTEVESSSGHELTFSHGNGIESNIPGLETKMKQKAAKGKQEFVVKINGLWIPSVENSEDLLNEQSMSQQCLTDQQHPLGEVDTTVKLSLVNNLEGSTSEKTATSAETMSTDSKTKNEADTQLYAPKQKALFPLFCLHSFLNLEDVTTLVPNAKTVTSSTHSEQIISSSGPLVINDHNPSSHEDGDDQIAMTSFSIATTETNDQGKNALNMFFIFLCYFKIHHPFDFELFLLSHNLFSYALKLEMLRQFDYDLQNEWDLETTEDFAAEVEVQATSGHMLISSQVLMNGESTSQQCLLDQLREVDTAVTSSQVNNLESSTTEKTSAATLSATSETKNGPSQGIEINVEEEEGTTSTNAKTIASSGQLVTSECKTASQEDGDSQIAMTSFSIATTETNDQVSLNDDAFMKGSCSNVEEQFPKDDKILVSRSRLFSTASQFLSTPSKGDAYEIVEDLSSSFLVKRELEQLVSKNHLDYENLSFLTDFLVKHPSVLLRDTSLSNRYKGYAYNCLSELLKFLQTHSVLDVLEKRALFLGLQVSQAALKKLLNSKYILTQHVEDLKHQLTSSETILESIIQQEALILETQAALSDPIGY 2182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00780 2182 Gene3D Ribonuclease Inhibitor 752 936 IPR032675 -
Tsu03g00780 2182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 471 IPR027417 -
Tsu03g00780 2182 MobiDBLite consensus disorder prediction 1588 1614 - -
Tsu03g00780 2182 Gene3D Ribonuclease Inhibitor 543 751 IPR032675 -
Tsu03g00780 2182 PRINTS Disease resistance protein signature 401 415 - -
Tsu03g00780 2182 PRINTS Disease resistance protein signature 661 677 - -
Tsu03g00780 2182 PRINTS Disease resistance protein signature 233 248 - -
Tsu03g00780 2182 PRINTS Disease resistance protein signature 305 319 - -
Tsu03g00780 2182 PANTHER - 58 170 - -
Tsu03g00780 2182 PANTHER - 185 1025 - -
Tsu03g00780 2182 MobiDBLite consensus disorder prediction 1588 1612 - -
Tsu03g00780 2182 Coils Coil 170 192 - -
Tsu03g00780 2182 Gene3D - 367 454 IPR042197 -
Tsu03g00780 2182 Gene3D Ribonuclease Inhibitor 940 1261 IPR032675 -
Tsu03g00780 2182 Coils Coil 108 128 - -
Tsu03g00780 2182 Pfam NB-ARC domain 223 457 IPR002182 GO:0043531
Tsu03g00780 2182 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 185 1025 - -
Tsu03g00780 2182 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 58 170 - -
Tsu03g00780 2182 SUPERFAMILY L domain-like 531 1000 - -
Tsu03g00780 2182 Gene3D - 182 364 IPR027417 -
Tsu03g00780 2182 Gene3D - 455 542 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00780 Tsu-Chr3 7045831 7110012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00780 215 644 WRKY Transcription Factor Family AT5G45050 24.726 9.88e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00780 - - cam:101507086 1334.7