Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00776 ATGCGCCGAAACAAGATGGCGAGTTTTCGATGTGTTGTGGAAAGGTTGATAAATCGGGCAATAAATGAAGCACCTCATGTATTTTGCTTTACATGCATTATTAATGAATTCGAAGAAGAAAGGGCTAAGTTGGAAGCGGAAAGGATAACTATGAAGCGACGCGTCAAATTGGCAAAAGCAAGAGATATCGATGTCAATGCTGCTGTTGCGTTTTGGGAAGAAGAAGTTGACAAGCTCAATGAACTGGacaccaaaacaaaagaaacatgtttttttggattttgtccaGATTGTATGTGGCGATATAAAAAGGGAAAAGAGTTGGCAACTAGCATTGAGCAGATTAAACGACTAAAAGAAGAGgcaagaaaatttgaaaatattgaacTCCCTCGTCGTCTTCCAGACATTGAGCATTATTCATCCCAACATTACATTTCTTTTCAAAGCAGAAAGTCAACGTACAAAGAACTATTGGATGCACTAATAGATGACAACAACTATATAACCGTATTGCAAGGAATGGGTGGCATCAGAAAAACTACTTTGGCCAAAGAAGTGGGTAGAGAACTAAAGCAATATGAACAATTTACTCATGTCATTGATACGACATTTTCATTTGATTTAAGGATTGAAACGATTCAAAATGATATTGCTGGATCTTTAGGATTTAAATTGAAGAGTTTAAGTAGAGCAGGGGCAGCCCTAGAACTATGGGAAAGATTAACAAATGGTGAGAAAATTCTTCTGATATTAGATGATGTGTGGTTACCACTTAGTTTCGTTTTAATAGGGATTCCAAATCGGGATGATCACAGAGGTTGTAGAGTTCTAGTAACCACATCTTGTAAAGGAACAGTGAATTGTGATAAGAGAATTGAACTGGAGCTTTTATCTGAAGAAGATGCATGGATCATGTTCAAAACTTATGCTGGTATAAGCGATAGTTCCTCAAAAAGTGTGACTGATAAGGGGCttgaaattgcaaaaaaatgCAAACAATTACCAATTGCAATTGCAGTTATCGCTCACCGTTGTAAAGGCCACGGTGATAGAATCCATGAATGGGATGTGACATTAAAATCCTTGAAGAATTGTGTATACATGGACTGTGTTGATGATGATATGTTTCAAATTTATAGTGTTTTGAAGTATAGCTTTGATTTTTTAGAGGATGTAAAAGCCAAGAGATTGTTCTTCTTATGTTCTTTATttcaagaaaatgaagaaatttcTATTGAAGTTCTAACCAGATTTATCATAGGAGCTGGTCATTTTGGGGATAATTATGGCAACTACAATGATGCTCGAAAGAGAGTAATTGTAGCAAAAAATGAACTCTTAGATCAGTATTTGTTGTTAGAGGCAGGTGAAAAGCATGTAAAAATGCATGATTTGGTTCGTTCAATGGCTCAATGGATGGCGTACAATCCGTACATACAGTTTGAAGAACGAATTAAAGGAGTAATTAATCTGTCTGAAACAAATCAAAAGTTGTTTGTTGAAAGGGAAAGAAatatcaaatatttatcatGTGAAGGGAAGGATGTGGATTTGTTTTCCTGTAAGTTTGAAGGTTCCAACCTTGAGATTCTTTTTGTCAAGGTGGATAGAGATGAAGATCGCAAATGTATAGAAGTCCCAAATTCTTTCTTTGAAAACATTGTCAAGCTtcgagttttttatttttcaggtAATGATAGACGACCTCTATCACTACCACACTCAATTCAGTCATTGACCAATATTCGATCTATTTTGATTGATAGAGTTGATTTAGGTAACATCTCTATTTTGGAAAACTTACAAAGTCTTGAGACTCTTGATTTGGTTCAATGTACAATTAATGAATTGCCAAGTGAAATTTCAAAACTGGAGAAATTCAAATTGTTGAAGTTGGAATATTGTGAAATTAGAATGAATAATCCATTTGAAGTTATCGAAAGATGCTTATCACTTGAAGAGTTGTATTTCATAGATAGCTTCAATGGTTTTTGTCAAGAAGTAAACTTCCCTGAGTTGCAAATATATCATATCCGTAAAGGGCGGGCTGTGATGAATGATTCACTGTCAAAATATGTGGTTTTTCCTTCAAATGATGATGCATATTGTTTTTCCAAAGCAACACTCAATTATTGCATGCAAACAGCAGAGGTTCTACGACTAAATGGAATTATTGGGGAGTGGAGAAATCTCATGCCTGAGATTGTTCCTATAGATCGAGGTATGGATGATCTTGTTGAGCTATGTTTGAGTTGTATTTCACAGTTACATTGCCTCATTGACACTATTGGTAATTCTCAAGTACCAACTGTTTTCTCCATGTTGGTTGTACTAAAACTGAATAGAATGGAAAATTTGGAAGAACTATTCAAAGGTACACTTTCCTTTCActcattgaagaatttagagaagCTATCAATCAAGGACTGTAAACATCTACAAAGCTTTTTTAAATGCAAGCTAAACCTCTGCAATCTAAAGACCATCAAATTGCAGAGTTGCCCGATGTTAGTCTCGCTGTATCAACTGTTGACTTCTCAAAACCTGGTGCAACTAGAGACATTGAAAATATCTCACTGCGATAGACTGAAGAACATAATAGCAGATGAAAGAATAGTGAAGGAATCAAGAGGAGAAATAGATGACAGTGTTAACAATACCAACTGTCTTCGATCGATGTTTCCAAAACTAAAAGTTCTTGATATTGAGGAATGTCCCTTATTAGAATCCATATTTCCTTTCCTCTTTTTACAAGACCTTCCGGTATTACAAACTATCAAAATTAGAAGATGTGATGGTTTGAAATACATATTTGACCAATGCCAACATGCAGAATTTGGTTCACTAAGACAATTGGAGCTATCTCAATTAACAAATTTCATTGGTATGTTTTGCATATCTAATCATCCCAGGAAATGCTATATCTCCTCTTGGGATACCACAGCTACTACAATCCCCTTGGTTGATGGGCACTACTCAGAATCAAATTCACATTTCCTAAAAAACAAATGTATTGGCCCAGTGTATCCACAATTAGAAGTATTTGATATTGAAGGATGTCCCCTATTAGAATCTATATTTCCTTTCCTCATTGTTCAAGACTTTCCGGTACTAGAAACAATCAAAATTAGAAGCTGTGATGGATTGAAATACATATTTGGCCAATACCAATATGAGAAATTTAGTTCACTGAGACAATTGGAGCTCTGTCAATTACCAAATTTCATTGATATGTTTTGCAAATGTAATCATCCCATATCCTTGTCTGAGAAAGGGTCATCTTCCACTTCCAATCATGGTTCCAAGGCACAATTACAATTTGATTCGGACCCCGTGAAATACAATATATTATCTTGGGATACCACAACTAGTACAATCCCATTGGTTGATGGTCATTACTTAGAATCAAATTCATATTACCTTAACATATGGGAGCGAGCTCAATGTCTTCGAATACCATCGAAGATCCTTTACAATATTAAAAAGATTGAACTGTCTCAATTTTCCAAGATAAAATCAGTATTTATCCCATCCATTGCTCCAAGAATGTTGTTGGAAACTTTGACAATTAGGAACTGTGATAAATTGAAGAACATAATAGACTTTGGAGATTATGACAGTGATAGAAATAATTGGGGCAATGTCTTCCCAAAAATGAAAGAGCTCTACATTGAAGGTTGCCCAAATATGGAATTCATATTTGGACACTACAGTACTGATGATCATCAAAATCAAGTTGAGATTCAGCTTCAACTTCTAGAATTGAAATGTCTAAGTCTTTGCAATCTGCCAAATTTAGTCGCCATGTGTCCCAAACATTATCGAATAAGATTTCCTCCTTTAGCGAAACTTGAACTCAATAAATGTTCTGAGGCTGCTATCAAATCTATGAGCCATGTTAGAATTCATCCAGTTTCAGAATCTCTGGACAGTACAATCATAAAGGAATGTGGTGATGGCCAAATAGCTATAGCTTCTCCTCCAATTTCCATGACAAAGCCTCTTACCACTCAAGATGTTGGTGTTAAAAACAGGCAGGAAACTAGTAAGACtaatgatgatgaaggtgaAGACTCTTCagAAACCAATGAACAAGGTGAAAATGCTATAATTGTGGGAGCTTTTTGTCCTTCAATGTTGTTTATTCCTTGA 4155 0.342 MRRNKMASFRCVVERLINRAINEAPHVFCFTCIINEFEEERAKLEAERITMKRRVKLAKARDIDVNAAVAFWEEEVDKLNELDTKTKETCFFGFCPDCMWRYKKGKELATSIEQIKRLKEEARKFENIELPRRLPDIEHYSSQHYISFQSRKSTYKELLDALIDDNNYITVLQGMGGIRKTTLAKEVGRELKQYEQFTHVIDTTFSFDLRIETIQNDIAGSLGFKLKSLSRAGAALELWERLTNGEKILLILDDVWLPLSFVLIGIPNRDDHRGCRVLVTTSCKGTVNCDKRIELELLSEEDAWIMFKTYAGISDSSSKSVTDKGLEIAKKCKQLPIAIAVIAHRCKGHGDRIHEWDVTLKSLKNCVYMDCVDDDMFQIYSVLKYSFDFLEDVKAKRLFFLCSLFQENEEISIEVLTRFIIGAGHFGDNYGNYNDARKRVIVAKNELLDQYLLLEAGEKHVKMHDLVRSMAQWMAYNPYIQFEERIKGVINLSETNQKLFVERERNIKYLSCEGKDVDLFSCKFEGSNLEILFVKVDRDEDRKCIEVPNSFFENIVKLRVFYFSGNDRRPLSLPHSIQSLTNIRSILIDRVDLGNISILENLQSLETLDLVQCTINELPSEISKLEKFKLLKLEYCEIRMNNPFEVIERCLSLEELYFIDSFNGFCQEVNFPELQIYHIRKGRAVMNDSLSKYVVFPSNDDAYCFSKATLNYCMQTAEVLRLNGIIGEWRNLMPEIVPIDRGMDDLVELCLSCISQLHCLIDTIGNSQVPTVFSMLVVLKLNRMENLEELFKGTLSFHSLKNLEKLSIKDCKHLQSFFKCKLNLCNLKTIKLQSCPMLVSLYQLLTSQNLVQLETLKISHCDRLKNIIADERIVKESRGEIDDSVNNTNCLRSMFPKLKVLDIEECPLLESIFPFLFLQDLPVLQTIKIRRCDGLKYIFDQCQHAEFGSLRQLELSQLTNFIGMFCISNHPRKCYISSWDTTATTIPLVDGHYSESNSHFLKNKCIGPVYPQLEVFDIEGCPLLESIFPFLIVQDFPVLETIKIRSCDGLKYIFGQYQYEKFSSLRQLELCQLPNFIDMFCKCNHPISLSEKGSSSTSNHGSKAQLQFDSDPVKYNILSWDTTTSTIPLVDGHYLESNSYYLNIWERAQCLRIPSKILYNIKKIELSQFSKIKSVFIPSIAPRMLLETLTIRNCDKLKNIIDFGDYDSDRNNWGNVFPKMKELYIEGCPNMEFIFGHYSTDDHQNQVEIQLQLLELKCLSLCNLPNLVAMCPKHYRIRFPPLAKLELNKCSEAAIKSMSHVRIHPVSESLDSTIIKECGDGQIAIASPPISMTKPLTTQDVGVKNRQETSKTNDDEGEDSSETNEQGENAIIVGAFCPSMLFIP 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00776 1384 Pfam NB-ARC domain 155 388 IPR002182 GO:0043531
Tsu03g00776 1384 Gene3D - 131 292 IPR027417 -
Tsu03g00776 1384 Gene3D - 297 391 IPR042197 -
Tsu03g00776 1384 Gene3D Ribonuclease Inhibitor 481 691 IPR032675 -
Tsu03g00776 1384 MobiDBLite consensus disorder prediction 1327 1369 - -
Tsu03g00776 1384 PRINTS Disease resistance protein signature 242 256 - -
Tsu03g00776 1384 PRINTS Disease resistance protein signature 798 814 - -
Tsu03g00776 1384 PRINTS Disease resistance protein signature 169 184 - -
Tsu03g00776 1384 PRINTS Disease resistance protein signature 332 346 - -
Tsu03g00776 1384 SUPERFAMILY L domain-like 462 1089 - -
Tsu03g00776 1384 MobiDBLite consensus disorder prediction 1331 1346 - -
Tsu03g00776 1384 PANTHER - 81 966 - -
Tsu03g00776 1384 PANTHER - 1062 1240 - -
Tsu03g00776 1384 Coils Coil 34 61 - -
Tsu03g00776 1384 Coils Coil 108 128 - -
Tsu03g00776 1384 Gene3D Ribonuclease Inhibitor 1006 1313 IPR032675 -
Tsu03g00776 1384 Gene3D Ribonuclease Inhibitor 880 981 IPR032675 -
Tsu03g00776 1384 Gene3D Ribonuclease Inhibitor 707 877 IPR032675 -
Tsu03g00776 1384 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 81 966 - -
Tsu03g00776 1384 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1062 1240 - -
Tsu03g00776 1384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 402 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00776 Tsu-Chr3 7005424 7012951 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00776 174 858 WRKY Transcription Factor Family AT5G45050 21.577 9.08e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00776 - - cam:101507086 1259.97