Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00775 ATGCCGGAGATCGAACAGCCACCTGAAATAACAGCCCTTTTCGGAAAATATGAATTGGGAAGAGTCGTTGGTTGCGGCGCGTTTGCGAAAGTTTACTACGCGCGTAACGTGAAAACGGGACAAAGCGTAGCtgtgaaaatcatcaacaaaaagaaaCTCTCCGGTACGGGTCTTGCAGGAAACGTGAAACGAGAAATTACAATTATGAGTCGTCTTCACCATCCTCATATTGTTCGTCTTCACGAAGTTCTAGCCACCAAGACGAAAATCTATTTTATTATGGACTTTGTTCGTGGTGGCGAGCTTTTCGCGAAGATTTCAAAGGGTAGGTTTAGTGAAGATCTTAGTCGGAGATATTTTCATCAATTAATCTCAGCCGTTGGTTATTGTCACTCGCGTGGCGTTTTTCATCGTGATCTTAAACCGGAGAATTTGTTATTAGATGAAAATGGGAATTTAAAAGTTTCGGATTTCGGGTTAAGTGCGGTTCGTGATCAGATCCGACCCGATGGATTGCTTCATACACTTTGTGGGACACCTGCTTACGTGGCACCGGAGATTCTCGCTAAGCGAGGATATGATGGCGCGAAAGTGGATGTTTGGTCGTGCGGCGTTGTTTTGTTCGTTCTTGCCGCGGGTTATCTTCCATTTAATGAGCAAAATTTAATGGTTATGTATCGAAAAATCTATAAAGGTGAATTCCGGTGTCCGCGTTGGATGTCAACGGATCTTCGACGGTTTTTATCGAAGTTGTTAGATACCAACCCGGAAACCCGGATCACGGTTGATGGTATGACCCGAGATCCGTGGTTTAGAAAAGggtataaacaaataaaatttcatgAGGAAGATTATGGATCGGGGTATGATTTAGGGTTCGGGTGTAAAGGTGATGGGTCTgaggttttgaatttgaatgcaTTTGATATTATATCATTTTCATCGGGTTTGGATTTATCCGGGTTGTTCGGAGAATTTGACGGGGTGGAGCGGTTTGTTTTACGGCAGTCGCCTGAGAAGATTTTGGAAGTGGTGGAGGAAGTTGGAACAGGAGAGGGAATGGCATTGAGGTGGAAGAAGGAATGTGGGGTTGAGTTGGAAGGATTGAGTGGTAAATTTGGAATTGAGATTGAGGTTTACCGGTTAACGGTGGAGGTGGCGATGGTTGAGGTTAGGAGGAGAGGAAGTGATGTGGCTGCGTTTTGTAATTTGTGGGATATTAAGCTTAAGCCTCAATTACTACGGGGTGAGGCAACGACGTCGTATCAGCCTGAATGTGAACCTGAATCGCCGGTTTCTAGTGATTGA 1308 0.4289 MPEIEQPPEITALFGKYELGRVVGCGAFAKVYYARNVKTGQSVAVKIINKKKLSGTGLAGNVKREITIMSRLHHPHIVRLHEVLATKTKIYFIMDFVRGGELFAKISKGRFSEDLSRRYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKRGYDGAKVDVWSCGVVLFVLAAGYLPFNEQNLMVMYRKIYKGEFRCPRWMSTDLRRFLSKLLDTNPETRITVDGMTRDPWFRKGYKQIKFHEEDYGSGYDLGFGCKGDGSEVLNLNAFDIISFSSGLDLSGLFGEFDGVERFVLRQSPEKILEVVEEVGTGEGMALRWKKECGVELEGLSGKFGIEIEVYRLTVEVAMVEVRRRGSDVAAFCNLWDIKLKPQLLRGEATTSYQPECEPESPVSSD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00775 435 Pfam NAF domain 304 356 IPR004041 GO:0007165
Tsu03g00775 435 CDD CIPK_C 306 413 - -
Tsu03g00775 435 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00775 435 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00775 435 Gene3D Kinase associated domain 1, KA1 301 415 - -
Tsu03g00775 435 Gene3D Transferase(Phosphotransferase) domain 1 8 288 - -
Tsu03g00775 435 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Tsu03g00775 435 PANTHER - 1 425 - -
Tsu03g00775 435 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Tsu03g00775 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 425 - -
Tsu03g00775 435 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00775 435 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Tsu03g00775 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00775 Tsu-Chr3 7003368 7004923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00775 1 421 CBL-interacting serine-threonine protein kinases AT2G30360 63.364 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu03g00775 Pkinase 4.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00775 - K12761 gsj:114377188 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00775 03 7003368 7004923 Tsu05g02991 05 40254673 40257465 PCT