Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00773 ATGGCGAGTTTCCTTACTGATTTGGTAAAGCCATTTGTGGAGAAATTGATAAATGGGGCAATCACAGAATCAAGTTATATATGTTGCTTCACGTGCATTGCTAAGGATTTTGAAGATCAAAAAGCTAGGTTGGAAGTAGAAAGGACAACTTTCAAGCAACGTGTTGATGTGGCAACTAGAAGCGGGGAAGATGTTCAAGCTAATGCTCTTTTATGGGAGAAAGAAGCTGAAGAGCTCATTCAAGAAgacaccaaaacaaaacaaaaatgtttttttggattttgttgtCATTGCTTATGGCGATATAGAAGGGGAAAGGAACTGGCAAATAAGAAGGAGCAAatcaaaaaattgatggaaaCTGGAAAGGAACTTGCAATCGGACTCCCCGCTCGTCTTCCAGATGTTGAACGTTATTCATCCCAATACTATATTCCTTTTAAAAGTAGGGAACCCAAATACAAAGAGCTTTTGGATGCACTGAACGATGAAAAAAGTTATATAGTCGGGCTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAATGGGCAAGGAACTTAAGCGGTCCAATCAATTTACTCATGTTATCGATACAACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGATGACTGTAATGAATCAGACCGATCCAAAAAACTATGGAGCAGATTAACCAAAGGTGAgaagattcttataatattggaTGATGTGTGGGGAGATATCGATTTTGATGAAATAGGGATTCCACACGTTGACAATCACAAAGGTTGTAGAGTTTTTGTAACCACGCGCAATACGTGGGTGTGCAACAGATTAGGATGCAGTAAGACAATCCAACTTGATCTCTTATCTGAAGAAGATGCATGGATCATGTTCCAAAGTCATGCTGGTCTAACCAaagtttcaacaaaaaatttgcTTGACAAGGGCCGTAAAATTGCAAATGAATGCAAAAGATTACCAGTTGCAATTGCTGCTATCGCCAGTAGTTTGAAGGGCGAACAACGTCGAGAAAAGTGGGATGTGGCCTTAAATTCCTTGCAGAAACAAATGTCCATTGACGGTGTTGATGAAGATTTGGTTGATATTTATAAATGTTTGAAGTTCAGCTATGATTATCTCAAGAACAAAAGCGCCGAGGAATTGTTCCTCTTATGTTCTGTATTCCAAGAAGATGAGGAAATCTCTATTGAAATTTTAACCAGACTTGGCATAGGAGTCGGCCTCTTTGGGGGAAGTTATGACAAATACAACAATGCTCGAAATCTAGTAGTTGTAGCAAAAGATAAACTACTTGATTCATGTTTACTGTTGAAGACAAATAAAAGAGATGTAAAAATGCATGACTTGATTCGTGAAGTAGCCCAATGGATTGCGAACAAAGAGATTCTAGTAGTAGatttttctaacaaaaataaaaaatcattactTGGAAAGGATAACAATATcaaatatttgtcatttcatGGAAATCCAATGGATTTGTGTTCCACTGggtttgatggttctaaacttAAGATTCTGATTTTCATCGTGGACAGAGGTTGCTTTGTGGACGTTCCAGtttcattctttgaaaatattgCAGGGCTTCGAGTTTTGAATTTAATAGCAAATTACCAAACTATACCATTACCACAATCAATTGGCTTATTGACGAATATTCGTTCTCTAATAATTGAAACTGCCTGTTTGGGTAACATCTCTGTTTTGGGAAGCCTGCAAAGTCTTGAGACACTTGATTTGAATAGTTGTACAATTGAAGAACTTCCACAAGAAATTGCAAAATTGAAGAAACTTAGATTGTTGAACTTGGAAGGCTGTAGTATTCAAAGTAATAATCCATTTGAAGTTATCCAGAAATGCACATCCCTTGAAGAATTGTACTTTGTGGATAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTGCAACATTAGAAAGGTATAATCTCACTGAAGGTTATAGTAAGTTTTACGATTCTTCACTATCAAAATGCGTGTCTCTTGAAAATGATTATTTGTCAGAAGCAACATTTAAGCATGTGATGCAAACAGCAGAGGATCTTAAGTTGGAAAGCATTAAGAAGGGATGGAGAAATATTATGCCTGAAATTGTTCCTATAGATGAAGGTATGAATGATCTAATTGAGCTTCATTTGAAAGATGATTCACAACTACAGTGCCTCGTAGACACTGAGCATATTGGTTTACCAACTGTTTTCTCTAAGTTGGTTATACTACATCTCGAGGATATGAAAGATTTGAAAGTATTATGCAACGGTCCCATCTCATTTGACTCTATGACCTACTTGGAGGAGCTATATATCAAGCGTTGTCAAAATTTGCGAAGCTTGTTTATATGCAGTCCAAATCTGTACAATCTAGTAACCATCACACTAAAGTCATGCTCAACATTGGTTTCTGTTTTCGAATTGTCAACTTCTCAAAGCCTGCCGCTGTTGGAGAACTTGAAAATTAGTAAATGTGAGCAATTggaaaacatatttacatatgaAAGGAACATGGGTGAGAGAATTGAAGAAATAATGGATGGTACTGATTATGATAACAAGAGTTGCAATTACCCAATGTTTCCAAAACTGAAAGTTGTTGAAATTGAGAGATGTCCCCAATTGcaatttatatttctctctGCTAGAGATCTTTTATTACTCGAAGTTATCAGAATAAATTGTTGTGATGAGTTGAAATACATATTTGGCCAACATAATCAAGATGTCAAACTTACTTCACTAAAAGAAATGGTGATTGGTGATTCGCCAAATTTCATTGATATATTTCCAGAATCTTATCTATCCATGCCTTCTTCTGTTAAACGTTCATCTAATTCCATTTCCATGCTACAAACACAATTGGAGCCTATCAAAACCAACATATTCTCTTGGACATGTTGTTATGGGCACAAATTAAGGGCTAGCACAAGTTCAAGTACTAGTACAAATACCGAAATCTCATCGGCTTTTGCGGATCGACCGAAAGACTGCTCAATCTCATTGGAAAGAAGTTCATATTGTCTTACCATATGGGAACGTGCTCAATGTCTTTCAAGACTATCACATATCATCTGCAATATTAAAGTGATCACATTGATAAGTGTTCCAAACATAAAATCAGTGTTTGTGTTATCTATTGCACCAAAAATGTTATTGGAGAGCTTGACTATTCAATATTGTGGTGAATTGGAGCACATAGTAGTAGACATTGAAGATGGGAGTGGTGGAAATGAATTGGATATTAATGTCTTCCCAAAATTAAAACAGCTCAATGTTGAAGAATGCAAGAAATTGAAATACATATTTGGGCGCATTAATgataatgatcaaaacaacaatgaGATTCAACTTCATCTTCCAGAATTGAAAAGTCTCAAGCTCTCATCTCTCCCAAGTTTAATCGGCATTTGTCCCAAACAATATCACACAACATTTTCACCTTTGAAAGTACTTAAATTCGATTGTTGCTCTCTGGATGATGTTAAATCTATTGGTGATTTTACCTTTCTTACTTCGATTTCAAGATACCAGGACAATACAACTGTCAAGGGTATCAAGATAAGTGTTGAAGATGACACTACATCAGCTAATGCCATGACAATAACATCATCCACTGATCATTCAAAATCAGTGAGTTCATCTTCACTGGTgagtttattttatgtatttattggGCCGATCCTACTTGTAAATGGAGATTGGAACCCTTCTCAAAAAGTGGAAAACTCAAGTTCTCCTTCTTTTGTCATTTGGGAGCTTGAGCAATTGGTCTCCGAGAATTATTTGGATTATGAGAACCTGTCTCTGTTAACTGATTTTCTTGTTAAGAATCCCTCACTTATTTTAAGGGGCACATCCCTGAGTTATAGATACAAGGGTTATGCCTACATCTGTCTGGCTGAGCTATTACAATTCCTCCAAACCCATAGTGTGTTGGATGTGTTAGGTCCTAGCCGCTCTAAATTTGTTAAATTATTACATGATGTGCGAAGCTTTGCTTTTGATAAGGATTGGTTGGATAGT 4092 0.3473 MASFLTDLVKPFVEKLINGAITESSYICCFTCIAKDFEDQKARLEVERTTFKQRVDVATRSGEDVQANALLWEKEAEELIQEDTKTKQKCFFGFCCHCLWRYRRGKELANKKEQIKKLMETGKELAIGLPARLPDVERYSSQYYIPFKSREPKYKELLDALNDEKSYIVGLQGMGGTGKTTLAKEMGKELKRSNQFTHVIDTTVSFSPDIKKIQDDIAGPLGLKFDDCNESDRSKKLWSRLTKGEKILIILDDVWGDIDFDEIGIPHVDNHKGCRVFVTTRNTWVCNRLGCSKTIQLDLLSEEDAWIMFQSHAGLTKVSTKNLLDKGRKIANECKRLPVAIAAIASSLKGEQRREKWDVALNSLQKQMSIDGVDEDLVDIYKCLKFSYDYLKNKSAEELFLLCSVFQEDEEISIEILTRLGIGVGLFGGSYDKYNNARNLVVVAKDKLLDSCLLLKTNKRDVKMHDLIREVAQWIANKEILVVDFSNKNKKSLLGKDNNIKYLSFHGNPMDLCSTGFDGSKLKILIFIVDRGCFVDVPVSFFENIAGLRVLNLIANYQTIPLPQSIGLLTNIRSLIIETACLGNISVLGSLQSLETLDLNSCTIEELPQEIAKLKKLRLLNLEGCSIQSNNPFEVIQKCTSLEELYFVDSFNDFCQEITLPATLERYNLTEGYSKFYDSSLSKCVSLENDYLSEATFKHVMQTAEDLKLESIKKGWRNIMPEIVPIDEGMNDLIELHLKDDSQLQCLVDTEHIGLPTVFSKLVILHLEDMKDLKVLCNGPISFDSMTYLEELYIKRCQNLRSLFICSPNLYNLVTITLKSCSTLVSVFELSTSQSLPLLENLKISKCEQLENIFTYERNMGERIEEIMDGTDYDNKSCNYPMFPKLKVVEIERCPQLQFIFLSARDLLLLEVIRINCCDELKYIFGQHNQDVKLTSLKEMVIGDSPNFIDIFPESYLSMPSSVKRSSNSISMLQTQLEPIKTNIFSWTCCYGHKLRASTSSSTSTNTEISSAFADRPKDCSISLERSSYCLTIWERAQCLSRLSHIICNIKVITLISVPNIKSVFVLSIAPKMLLESLTIQYCGELEHIVVDIEDGSGGNELDINVFPKLKQLNVEECKKLKYIFGRINDNDQNNNEIQLHLPELKSLKLSSLPSLIGICPKQYHTTFSPLKVLKFDCCSLDDVKSIGDFTFLTSISRYQDNTTVKGIKISVEDDTTSANAMTITSSTDHSKSVSSSSLVSLFYVFIGPILLVNGDWNPSQKVENSSSPSFVIWELEQLVSENYLDYENLSLLTDFLVKNPSLILRGTSLSYRYKGYAYICLAELLQFLQTHSVLDVLGPSRSKFVKLLHDVRSFAFDKDWLDS 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00773 1364 Gene3D - 135 296 IPR027417 -
Tsu03g00773 1364 Gene3D - 299 392 IPR042197 -
Tsu03g00773 1364 Gene3D Ribonuclease Inhibitor 470 719 IPR032675 -
Tsu03g00773 1364 Gene3D Ribonuclease Inhibitor 806 939 IPR032675 -
Tsu03g00773 1364 PANTHER - 62 954 - -
Tsu03g00773 1364 Pfam NB-ARC domain 156 389 IPR002182 GO:0043531
Tsu03g00773 1364 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 62 954 - -
Tsu03g00773 1364 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1039 1161 - -
Tsu03g00773 1364 PANTHER - 1039 1161 - -
Tsu03g00773 1364 SUPERFAMILY L domain-like 463 971 - -
Tsu03g00773 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 400 IPR027417 -
Tsu03g00773 1364 SUPERFAMILY RNI-like 1049 1183 - -
Tsu03g00773 1364 Coils Coil 34 54 - -
Tsu03g00773 1364 CDD AAA 154 280 - -
Tsu03g00773 1364 PRINTS Disease resistance protein signature 589 605 - -
Tsu03g00773 1364 PRINTS Disease resistance protein signature 241 255 - -
Tsu03g00773 1364 PRINTS Disease resistance protein signature 334 348 - -
Tsu03g00773 1364 PRINTS Disease resistance protein signature 168 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00773 Tsu-Chr3 6844603 6938853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00773 169 626 WRKY Transcription Factor Family AT5G45050 22.642 4.24e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00773 - - mtr:MTR_3g062420 1383.24