Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00768 ATGGATGAAATAAGCACACTCTGTGGAATCCAAGCATGTGCAATAGTCTACGGTCAAAATGATCCTCAACCAGATATGTGGCCATCACCAGAGGGAGTCAATACTGTGCTGTCAAGGTTTAGGAGATTACCTGAAACGGAACAAACCAAAAGGATGCAGGATCAAGAGAGTTTCTTGAGGGAAAAGATACAAAAGGGACAAGAACAGTTGAACAAACTTAAGaatgaaaacagaaaaaaggAACTGACTCAACTCATGTTTCAATGTCTTAATGCTGGTCAGGTTGTTGACAATGTTGGCAGCATGCGTGATCTCCATGGTCTCAATTGGTTGGTCGAtcataatttgaaacaaatcgAAAGGCGCATGGAAGAGATGCGAGTTGCACCGGTGGTTGAAAATCGTGCTGAAAATGTGGTTGGAATGCAGCAGGGAAATGTGATGGTTGTCGAAAATCGTGCTGGAAATGTGATTGGAAGGGAGCAGGGAAATGTGATGGTTGGAAGGGAGCAGGGAAATATGATGGTTGTTGAAAATCGTGCTGAAAATATGATTGGAAGGGAGCAGGGAAATGTGATGGTTGGAAGGGAGCAGGAAAATATGATGGTTGTCGAAAATCATGCTGAAAATGTGATTGGAATGGCGCAGGGAAATATGATGGTTGTCGATAATCGTGCTGAAAATGTGATGGGAAGGGAGCAGGGGATGGAAAACAATGTTAATGCAATGCAGACAGAACAATTGCCATTTGACTTCAtgaccaacaacaacaattttgGTGATGTGTTATCATTTGACAATGGTCACAATGTGCCAAATTTTTGGCCTTGA 831 0.4007 MDEISTLCGIQACAIVYGQNDPQPDMWPSPEGVNTVLSRFRRLPETEQTKRMQDQESFLREKIQKGQEQLNKLKNENRKKELTQLMFQCLNAGQVVDNVGSMRDLHGLNWLVDHNLKQIERRMEEMRVAPVVENRAENVVGMQQGNVMVVENRAGNVIGREQGNVMVGREQGNMMVVENRAENMIGREQGNVMVGREQENMMVVENHAENVIGMAQGNMMVVDNRAENVMGREQGMENNVNAMQTEQLPFDFMTNNNNFGDVLSFDNGHNVPNFWP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00768 276 Gene3D - 1 66 IPR036879 GO:0003677|GO:0046983
Tsu03g00768 276 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 1 221 - -
Tsu03g00768 276 SUPERFAMILY SRF-like 3 64 IPR036879 GO:0003677|GO:0046983
Tsu03g00768 276 Coils Coil 56 83 - -
Tsu03g00768 276 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00768 Tsu-Chr3 6790777 6791607 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00768 3 127 Type I MADS-box Gene Family AT5G48670 43.182 1.39e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00768 - - gmx:100816084 154.451