Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00763 ATGGACGAAGTCGTATCAAATTGGACAATGGAATTTCTCCTTCAAAGCTTCGTTCCCGATTCAACAATTCAAAAAACCCTAACCACCGTTCTTCCACATTCCACCGCCAATTCTCGTCTCAAAATAGCACTTCTCCTCCGCACTCTTCAAACTTCCCTCCTCAACGCTTCCCTCTCCGAAACCTCTCTCGAAATTCTCGAACACCTCGAAAATCTTTACCACAACGACGCAATTCCAATCTTGGATACAATGCGCAGTGCTTACTGTGCTGTTGCGGTTGAAAACACTGTTAAGTATCTTATTACTTGTCCTGAAAGTCCTTCCGGTGAGTACTTTTTTGCTGTTCGACGGATCTGGCGTGAAAGGGTTTGTCAATTGTCGGAAGAGGGACGGAGGAGTGAGCTTTTGTCTGATGAGTTGGTTCAGTGGAAACAAGAAGTTGAAGCTGCGCTTTTTGATGTTGGGGTTTCGGAGAGGCTTGTTGGGTTGAATACAAGGAGAGATGctatgaatgaaatgaagagGTTTTTGAAGGAAGCTTGGGGAATTATTGGACTTTCGTTTATTGATTCGATGGCGTTGGTTTCTGATGGGGAGGGTTTACGCCCTGAAGGTGTTTGTGAAATTGCTTCGGGTAGTGAAGTGTCGAAGAACTGTGATGGAATGTTAGAAGGTTTGGAAAAGGAGAAAATGAACTCTGTTGGTGATGATGAGAAGGATAACAAGAATGAGAATGCGAATGATCATGGTGATCATGACGGTGATGTGGCAACGATGGGCGAAAATCATGGCAATGAGCAATTGGAAGAGAGAGTTGGGACTTCTAATGATGCAAATCAGGAAGTGGGTGGGTGTGATTCTTCGAAGGAAGATAAAgAAATCCGGAAAGACAATCTTCAACGCAAACGCAATCACTCTGCAATTCGAACACACAATAAGGGAGTTAGAATCTCTGGCGCTGATGAGAAGGATAACAAGAACGAGAATGCGAATGCTAATGtgaatgatgatggtgatgtgGCAACAATGGGCGAAAATCATGGCAATGAGCAATTGGAAGAGAGAGTTGGGACTTCTAATGATGCAAATCAGGAAGTGGGTGGGTGTGATTCTTCGAAGGGAGATAAagAAATCCGGAAAGACAATCTTCAACGCAAACGCAAGCACTCTGCAATTCGAACACACCATAAGGGAGTTAGAATCTCTGGTGCTGAGGaagcaaaaacaacaaatttgtCGTGTAAATGTGAAAGCTTGTCTAGTGGTGAAGTAAAAAAAGTTCGGGAATCCCTTAAATCAAGTTCTATGGAGTTAAAGGCAATGGTAAAGGATCCTCTTCCTGATGCATTGCAGGCATCTGAAGTTGTAAGATCCAAATTGGCTTCAAAAGATATAAATCACAGGTCACCCATTGAAAACCAGAGTGGACATGTAGATGTACCAGATTCAACTGCATGCAAGACTATTATACTTTATCAGCCTAATGATGTCAATCCTGGAAAGAAGTCTTCTGTTCattgtagtagtagtagtagtagtcgTCGCCCCAAGTTAATGGAACGGGCAAGTTCTGCTCATACTTTCGAGTGGAATGATTCAATAGAGAACTTACCGCTgccaaaaaagaagaaaaggagaTGGACTTCATTGGAAGAGGAGACACTAAGGGCTGGTGTaaaaatGTTTGGAGAAGGAAGCTGGAGTGCAATCCGAGAATTTTACAGCaacatatttgaatttagaaGTGCAgTTGATCTGAAGGACAAGTGGAGAAATTTGATTCGGTGA 1788 0.4021 MDEVVSNWTMEFLLQSFVPDSTIQKTLTTVLPHSTANSRLKIALLLRTLQTSLLNASLSETSLEILEHLENLYHNDAIPILDTMRSAYCAVAVENTVKYLITCPESPSGEYFFAVRRIWRERVCQLSEEGRRSELLSDELVQWKQEVEAALFDVGVSERLVGLNTRRDAMNEMKRFLKEAWGIIGLSFIDSMALVSDGEGLRPEGVCEIASGSEVSKNCDGMLEGLEKEKMNSVGDDEKDNKNENANDHGDHDGDVATMGENHGNEQLEERVGTSNDANQEVGGCDSSKEDKEIRKDNLQRKRNHSAIRTHNKGVRISGADEKDNKNENANANVNDDGDVATMGENHGNEQLEERVGTSNDANQEVGGCDSSKGDKEIRKDNLQRKRKHSAIRTHHKGVRISGAEEAKTTNLSCKCESLSSGEVKKVRESLKSSSMELKAMVKDPLPDALQASEVVRSKLASKDINHRSPIENQSGHVDVPDSTACKTIILYQPNDVNPGKKSSVHCSSSSSSRRPKLMERASSAHTFEWNDSIENLPLPKKKKRRWTSLEEETLRAGVKMFGEGSWSAIREFYSNIFEFRSAVDLKDKWRNLIR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00763 595 MobiDBLite consensus disorder prediction 284 304 - -
Tsu03g00763 595 MobiDBLite consensus disorder prediction 315 330 - -
Tsu03g00763 595 MobiDBLite consensus disorder prediction 497 520 - -
Tsu03g00763 595 Gene3D - 547 595 - -
Tsu03g00763 595 SMART sant 543 595 IPR001005 -
Tsu03g00763 595 MobiDBLite consensus disorder prediction 497 518 - -
Tsu03g00763 595 CDD SANT_TRF 545 595 - -
Tsu03g00763 595 MobiDBLite consensus disorder prediction 230 339 - -
Tsu03g00763 595 MobiDBLite consensus disorder prediction 230 270 - -
Tsu03g00763 595 ProSiteProfiles Myb-like domain profile. 539 594 IPR001005 -
Tsu03g00763 595 Pfam Myb-like DNA-binding domain 544 593 IPR001005 -
Tsu03g00763 595 MobiDBLite consensus disorder prediction 352 376 - -
Tsu03g00763 595 PANTHER MYB TRANSCRIPTION FACTOR 1 595 - -
Tsu03g00763 595 SUPERFAMILY Homeodomain-like 541 594 IPR009057 -
Tsu03g00763 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 539 595 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00763 Tsu-Chr3 6759570 6763282 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00763 547 594 Single Myb Histone (SMH) Gene Family AT1G15720 56.250 6.43e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu03g00763 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00763 - K11111 lang:109329694 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00763 03 6759570 6763282 Tsu03g00763 03 6759570 6763282 ECH