Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00759 atGGAAACACAAATGCAAGATCCACCATCAAACTCAAACTCTAATCCCAATCCCAATCCCAATGCCACTTCATCATCAACAAACCCTTCTTCCAAAATCTTCATCCGCGGCACCGTTAACGGTGTTTCCACCACCGCATCCGTCGCCGGCGAACCTCACTCACACCACCGTAGATCGCACTCAGAGATCAACTACCGTCTTCCCGACGACATGATGGACCTCTCTCCCTCAGATCCATTAAACGGCGGAGGATCTTCCACAGCTAGCTTTGAAGAGATCGGATCCGAAGATGACCTGTTCTTCACCTACATTGACGTTGAAAAGCTCGGAGGTGTTACAAACGGTTTGAATCGCGGTGGAAATGGATCCGATCAGAACGGTTATGGTAACGGTAACGGTGTTGGAACGAGTGGTAATAACGATGGAGATAAGAGTCCGAATGATGCTACTACGCCGAGATCGAGACATAGACATAGTTGCTCCGTTGATGGTTCAACGTCGACGAGTATGTTTGGAGAGATCATGGATGCAAAGAAAGCTATGCCTCCTGATAAACTTGCTGAACTTTGGACTATTGATCCAAAACGTGCTAAGAGAATACTTGCAAACCGGCAATCTGCTGCACGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAGGTTCAGACCCTTCAAACAGAAGCCACAACTCTCTCTGCTCAATTGACACTATATCAGagggaCACAAGTGGTCTGAGTAATGAAAATACCGAGCTTAAGATCCGTCTGCAAGCAATGGAACAACAGGCACACCTTCGAGATGCTCTTAACGATGCGTTGATGAAGGAAGTTGAGAGGCTCAAGATTGCTACTGGGGAGGCAATGAACCCCACTGAATCTTTTAATATGGGAATGCACCAGATGCAATTTGGAGGGTCAAATTTCTTTTCAATGCCGCAACATTCAGGTCCTTCAAGTCACCACCAGGACATACAATTTCAATTTGGTCACTCCCCATCTAACATGCCGAATCATCAGATGCAACAAACCAATTCCCACCAAATGTCAGACATGCTGCAAAATGATCAGCTCGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCAACCCTCGTGAAGTCTGAAGGTCCGTCAATATCTGCAAGTGAGAGTAGCACTACATTTTGA 1182 0.4602 METQMQDPPSNSNSNPNPNPNATSSSTNPSSKIFIRGTVNGVSTTASVAGEPHSHHRRSHSEINYRLPDDMMDLSPSDPLNGGGSSTASFEEIGSEDDLFFTYIDVEKLGGVTNGLNRGGNGSDQNGYGNGNGVGTSGNNDGDKSPNDATTPRSRHRHSCSVDGSTSTSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSNENTELKIRLQAMEQQAHLRDALNDALMKEVERLKIATGEAMNPTESFNMGMHQMQFGGSNFFSMPQHSGPSSHHQDIQFQFGHSPSNMPNHQMQQTNSHQMSDMLQNDQLGRLQGLDISSKGSTLVKSEGPSISASESSTTF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00759 393 Coils Coil 246 266 - -
Tsu03g00759 393 SMART brlzneu 191 255 IPR004827 GO:0003700|GO:0006355
Tsu03g00759 393 SUPERFAMILY Leucine zipper domain 195 249 IPR046347 GO:0003700|GO:0006355
Tsu03g00759 393 MobiDBLite consensus disorder prediction 116 147 - -
Tsu03g00759 393 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 256 IPR004827 GO:0003700|GO:0006355
Tsu03g00759 393 MobiDBLite consensus disorder prediction 373 393 - -
Tsu03g00759 393 MobiDBLite consensus disorder prediction 116 167 - -
Tsu03g00759 393 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 390 - -
Tsu03g00759 393 MobiDBLite consensus disorder prediction 1 33 - -
Tsu03g00759 393 CDD bZIP_plant_RF2 196 245 IPR044759 GO:0003700|GO:0006355
Tsu03g00759 393 Pfam bZIP transcription factor 195 252 IPR004827 GO:0003700|GO:0006355
Tsu03g00759 393 PANTHER BZIP TRANSCRIPTION FACTOR 1 390 - -
Tsu03g00759 393 MobiDBLite consensus disorder prediction 68 90 - -
Tsu03g00759 393 Coils Coil 211 238 - -
Tsu03g00759 393 Gene3D - 195 246 - -
Tsu03g00759 393 MobiDBLite consensus disorder prediction 314 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00759 Tsu-Chr3 6746535 6749523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00759 5 393 bZIP Transcription Factor Family AT2G40620 46.714 5.29e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu03g00759 bZIP_1 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00759 - - gmx:100775607 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00759 03 6746535 6749523 Tsu03g00759 03 6746535 6749523 ECH
Tsu03g00759 03 6746535 6749523 Tsu05g03004 05 40392966 40395760 PCT