Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00758 ATGGTTGAAGAAATACCTTTCATTGTATTATGTGTGCTCACTTTGAGTTTAGcttttttcctcaaaaaaattctctcaaaaagtcaaacaaaaaatgttCCAAAAGGATCTTTGGGGTATCCTATTATTGGAGAGACACTTAGTTTTCTTAAAGCACAAAGGAAAGACAAGGGCTCTGATTGGATAGAAGAAAGAGTATCTAAGTATGGTTCTGTTTTCAAAACATCTTTAATGGGTTCACCTACAGTGTTTATTATTGGACAACAAGGAAACAAGTTTGTTCTTGGCACCTCAGATGATATTATTTCAGCTAAGAAACCTCCAACCCTTCAAAAGATACTTGGAAAGCAAAGCATAATTGAACTTACAGGATCAAGGCACAGGTTGATAAAGGGGGAAATGTTGAAATTCTTGAAACCTGAATGTCTTCAGAACTATGTCAAAAAGATGGATGAATTAGTAAGCACAGTATTActtaaagaattgaaagaaaataaaacaattgaagtTGTAAGGTTGATGAAGAAACTGTCCTATGATATGGCATGCAATGTATTATTTGACATAGATGAACAAACAAGGGAGattctttttgaagattttatcaCAGCATTTAAAGCAATTCACTCTCTTCCAATAAATTTTCCTGGTACTTCATTTTGGAGAGGCCAAAAGGCTAGAGCAAGAATTGTGGAAAAAATACTTCCTATTATGAACAAAAGAAGAGAGGAATTGTCGAAAGGAGCTATAAGTTCTACTAATGATATGCTTTCTTGCCTTCTTGCAATAAGGGATGAAAATGGTCAACCTCTAGATGATGATATAATTactgacaattttatttttctatttgttgCAAGTCATGACACATCTGCTACCCTAATGAGTTTGATGATATGGAAGTTATCTAGAGATCCAGATGTTTACCATAAAGTTTTAGAAGAACAAATGGAAATCTTAAAACAAAGGGAAGGAAACGAAGACAGATTAACTTGGAGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCGCAAGAATTGATGAGGATGATCCCACCTGCCTTTGGCGGATTTAGGAAAGCACTTAAAGATACTAGTTATGAAGGATACGACATACCAAAAGGGTGGACGGTATATTGGGCATCATGTGGAACACATATGGACAAAGATATATTTGAGAATCCACAAGAGTTTGATCCATCTCGTTTTGAAAATCAAGCTAAGCCAATCCCACCATTTTCTTACCTTCCATTTGGTGCAGGGGTACATTATTGCATAGGGAATGAGTTTGCTAGGGTTGAGACCTTAACTACCATTCACAATTTTGTGAACATGTATGAATGGTCTCAATTGAACCCTGAGGAAACTATTACTCGTCAACCAATGCCATATCCATCTTTGGGTCTCCCAATTAAGATCAAACAAAGATGTAATATGTCTTAA 1446 0.3326 MVEEIPFIVLCVLTLSLAFFLKKILSKSQTKNVPKGSLGYPIIGETLSFLKAQRKDKGSDWIEERVSKYGSVFKTSLMGSPTVFIIGQQGNKFVLGTSDDIISAKKPPTLQKILGKQSIIELTGSRHRLIKGEMLKFLKPECLQNYVKKMDELVSTVLLKELKENKTIEVVRLMKKLSYDMACNVLFDIDEQTREILFEDFITAFKAIHSLPINFPGTSFWRGQKARARIVEKILPIMNKRREELSKGAISSTNDMLSCLLAIRDENGQPLDDDIITDNFIFLFVASHDTSATLMSLMIWKLSRDPDVYHKVLEEQMEILKQREGNEDRLTWREIQKMKYTWRVAQELMRMIPPAFGGFRKALKDTSYEGYDIPKGWTVYWASCGTHMDKDIFENPQEFDPSRFENQAKPIPPFSYLPFGAGVHYCIGNEFARVETLTTIHNFVNMYEWSQLNPEETITRQPMPYPSLGLPIKIKQRCNMS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00758 481 PRINTS E-class P450 group IV signature 410 426 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS E-class P450 group IV signature 426 444 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PANTHER CYTOCHROME P450 26 6 475 - -
Tsu03g00758 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Tsu03g00758 481 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 475 - -
Tsu03g00758 481 Pfam Cytochrome P450 34 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00758 481 Gene3D Cytochrome P450 23 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00758 Tsu-Chr3 6736146 6743744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00758 7 481 Cytochrome P450 AT4G19230 34.021 8.99e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00758 - - gmx:100790209 793.497