Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00754 ATGCCGGTGAAAATGCAAGCCTGTTCGACAGTGTTGTTGGCCGACATTCCATTAGTAATGGAACAATTTGCTGTGAAAAAAATCACTGTGGCGGGTACAATTCAACGACAACAAGGTTATGAAATTATCATTCACTGTTTTGTTCAACGACAACAAGGTTATTGCAAAATCAATCAATGGTTTAAGCAATCGATGACACCAAATCTTTTCAATTCGATTTTGATTGCTGAATCTCGTACGCCTCTCATCAGAATCACTTCTCTATCCAGAATCACTCTGTTGAATTGCATCTACAGAATCGCTTTGTCAAAATCACTTCGTCCGAATCGCTTCGGCAATCGCTCATCATCTTTGCTTCCTCAAGATCTGATGACTGTGGTCGAGGTTTATGCCGGGGGAAGTAAGATTAATCCTCCTCACCAATTGGAGAGTTCTCCTAAGCTACGCTCTCTACTCATTGAAGGTGTTGCACAGAACACTAATGACAGTGTTTATGTCCCTGAGGGTGCTAATGATGTCGAGGTTACTGGGTCACCAACAGAAAAGGAAATTTTACATCGGGAATTAAGGTCTGTTTTGGAAAATTAG 588 0.4116 MPVKMQACSTVLLADIPLVMEQFAVKKITVAGTIQRQQGYEIIIHCFVQRQQGYCKINQWFKQSMTPNLFNSILIAESRTPLIRITSLSRITLLNCIYRIALSKSLRPNRFGNRSSSLLPQDLMTVVEVYAGGSKINPPHQLESSPKLRSLLIEGVAQNTNDSVYVPEGANDVEVTGSPTEKEILHRELRSVLEN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00754 195 PANTHER CATION TRANSPORTING ATPASE 119 187 - -
Tsu03g00754 195 PANTHER CALCIUM-TRANSPORTING ATPASE 119 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00754 Tsu-Chr3 6703835 6707355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00754 124 185 Primary Pumps ATPases AT5G57110 54.839 4.74e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00754 K01537 - gmx:100792945 106.686