Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00742 ATGGCAGATGAAGCACAGATTGATGTGAAGGAGGAGGTTCCCGATATTGCACCATTTGATCCTactaaaaagaagaagaaaaagaaaaccacAGTTGTAGATCTTGATGATGATTCAGTAGACAAGTTGGCTGAGAAGACAGAAAATCTGTCAgTTTCGGAGGGGTTTGACAGTACATTAGTTGGTgcgaaaaagaagaagaagaagcagGTTGATATCAGTAACTTAATTGATGAGAGTGTTGATGCGAAAAATGAAGATTTGGATGATCTCGCTGAAGATGATGACCAAGATGCTGCTTTGTTGCAACCTCGTTACCCTTGGGAAGGGAGTGATCGTGATTATCAATACGAGGAGCTTTTGGGCAGGGTGTTTAACATTCTGCGTGAGAATAATCCAGAACTTGCTGGAGACCGGAGGAGGACTGTTATGAGGCCTCCACAAGTGCTTCGTGAGGGCACAAAGAAAACtgtttttgtgaattttatgGACCTTTGCAAAACGATGCACCGGCAGCCAGATCATGTCATGGCTTTCTTGCTTGCTGAATTGGGTACTAGTGGTTCTCTAGATGGACAGCAGAGATTGGTCGTGAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTTTGCGTCGATATGTCAATGAATATGTCATTTGTCTTGGATGCAAAAGTCCCGACACAATACTTTCTAAGGAGAACCGTTTGTTCTTTCTCCGCTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCACAGATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGACCGCAGGAGGGACATGA 813 0.4071 MADEAQIDVKEEVPDIAPFDPTKKKKKKKTTVVDLDDDSVDKLAEKTENLSVSEGFDSTLVGAKKKKKKQVDISNLIDESVDAKNEDLDDLAEDDDQDAALLQPRYPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAQIKAGFVARVGRRTAGGT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00742 270 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Tsu03g00742 270 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Tsu03g00742 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Tsu03g00742 270 MobiDBLite consensus disorder prediction 1 31 - -
Tsu03g00742 270 Gene3D - 112 254 - -
Tsu03g00742 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Tsu03g00742 270 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Tsu03g00742 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00742 Tsu-Chr3 6605992 6610117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00742 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 73.134 9.72e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00742 K03238 - jre:109002409 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00742 03 6605992 6610117 Tsu03g00742 03 6605992 6610117 ECH