Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00738 ATGAAGGCCACCAAAGTTTACTCTAAATTTATGTTCATGAAGTTCTATTCTGGTTCAGTGGCTTCTTTCCTTTTTGTGATAGCTATTTTGTTCCCTCTTGCTATTGCTGCCGACCTTAATTCCGATAAGCAAGGACTTCTTGATTTTATCAATGCTGTGCCACACCGTCGAAGCCTGATGTGGGATCCATCTACCTCAATCTGTACATCTTGGGTTGGCATCACTTGCAATCGAAATGGAACTCGAGTTGCTAAAGTCCGGCTCCCAGGAGTCGGACTAGTTGGCTCCATCCCACCCAATACACTCGGAAAGCTTGATGCCGTGAAAATTATTAGTCTTCGTTCCAACCTACTCGGTGGAAATCTTCCTGCTGACATTGCTTCTCTTCCGTCTCTTCAGTATCTCTACCTCCAGCATAATAACTTTTCCGGTGGTATTCCTACCTCATTGTCACCCCAACTAGTTGTACTTGATTTGTCTTATAATTCTTTCTCTGGTAGAATTCCAAAGTCATTACAAAATTTGACAGAACTGAATAGTCTGAATCTCCAAAATAACTCGCTATCTGGAACCATACCTAATCTCAATGTTACAAAGCTCGGTAATTTGAATTTAAGCTACAACAATTTGAGTGGACCTATCCCTTCATCCCTCCGTGTATATCCTAATTCATCGTTTGAAGGAAACTCTCGTTTATGTGGACCGCCTCTAAAGTCATGTTCTATGATTCCATCTACACCTCCTCCTGCCTTAACTCCTATTCCACCTGGAAAACGAAgctccaaaaataaattaagtaagATAGCTATCATTGCCATTGCAGTTGGAGGAGCCATGCTGCTATTTTTTGTAGttcttgttattgttttttGCTGTTTGAAGAAGGACAATGACGAAAGCTCCGGAGAAATTAAAGGAAAGGGTCCTGGCGGCGGCGGCGGCGGCGGCGGTAGGGGTGATAAGCCAAAAGAAGAGTTTGGGAGTGGAGTGCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAAGGAAGTTCTTATAATTTTGATCTTGAAGACTTACTTAGAGCTTCAGCTGAAGTTCTTGGAAAAGGTAGCTATGGTACCTCATATAAGGCTATATTGGAGGAAGCAATGACAGTTGTGGTTAAGAGGTTGAAAGAAGTTGTGGTAGGCAAAAAGGAGTTTGAACAACAGATGGAGATTATGGGAAGGGTTGGACAACATGCGAATGTTGTGCCGCTTCGCGCTTATTATTATTCGAAAGATGAAAAGCTTATGGTTTATGACTATGTCCCGGCTGGCAACTTATCCACACTCTTGCATGGAAGTCGATCAGGTGGAAGAACTCCATTAGATTGGGACTCGAGAGTAAAAATATCTCTTGGAACTGCAAGAGGACTTGCGCACATCCATTCTGTCGGAGGTACCAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAACGACGGCTGCATTTCTGATTTCGGCCTGACATCACTTATGAACGTTCCTGCAAACCCTTCTAGAGCTGCAGGATATCGCGCGCCTGAGGTGATTGAAACCCGTAAGCACTCTCATAAATCAGATGTCTACAGCTTTGGTGTCCTCCTTCTTGAACTCCTTACAGGTAAAGCGCCTCTCCAATCTCCTGGACGTGATGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTCGTTCGGGAGGAGTGGACAGCGGAGGTTTTCGATGTTGAGCTAATGAGGTACCAAAACATCGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCTTGTGTAGCAAAAGTGCCTGATATGAGACCTAACATGGTAGAAGTTGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGACCGTCTTCCGAAGAGAATAAATCTAAGGACTCAAATGTTCAAACTccataa 1953 0.4275 MKATKVYSKFMFMKFYSGSVASFLFVIAILFPLAIAADLNSDKQGLLDFINAVPHRRSLMWDPSTSICTSWVGITCNRNGTRVAKVRLPGVGLVGSIPPNTLGKLDAVKIISLRSNLLGGNLPADIASLPSLQYLYLQHNNFSGGIPTSLSPQLVVLDLSYNSFSGRIPKSLQNLTELNSLNLQNNSLSGTIPNLNVTKLGNLNLSYNNLSGPIPSSLRVYPNSSFEGNSRLCGPPLKSCSMIPSTPPPALTPIPPGKRSSKNKLSKIAIIAIAVGGAMLLFFVVLVIVFCCLKKDNDESSGEIKGKGPGGGGGGGGRGDKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEEAMTVVVKRLKEVVVGKKEFEQQMEIMGRVGQHANVVPLRAYYYSKDEKLMVYDYVPAGNLSTLLHGSRSGGRTPLDWDSRVKISLGTARGLAHIHSVGGTKFTHGNIKSSNVLLNQDNDGCISDFGLTSLMNVPANPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLELLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPNMVEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00738 650 ProSiteProfiles Protein kinase domain profile. 355 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00738 650 Gene3D Ribonuclease Inhibitor 196 241 IPR032675 -
Tsu03g00738 650 Gene3D Ribonuclease Inhibitor 39 195 IPR032675 -
Tsu03g00738 650 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Tsu03g00738 650 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Tsu03g00738 650 PANTHER LRR RECEPTOR-LIKE KINASE 9 650 - -
Tsu03g00738 650 PANTHER OS05G0588300 PROTEIN 9 650 - -
Tsu03g00738 650 Pfam Leucine rich repeat 95 142 IPR001611 GO:0005515
Tsu03g00738 650 Pfam Protein kinase domain 358 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00738 650 MobiDBLite consensus disorder prediction 627 641 - -
Tsu03g00738 650 CDD STKc_IRAK 361 626 - -
Tsu03g00738 650 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515
Tsu03g00738 650 SUPERFAMILY Protein kinase-like (PK-like) 359 633 IPR011009 -
Tsu03g00738 650 MobiDBLite consensus disorder prediction 627 650 - -
Tsu03g00738 650 SUPERFAMILY L domain-like 60 237 - -
Tsu03g00738 650 Gene3D Transferase(Phosphotransferase) domain 1 431 649 - -
Tsu03g00738 650 MobiDBLite consensus disorder prediction 299 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00738 Tsu-Chr3 6576020 6580650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00738 15 648 Receptor kinase-like Gene Family AT5G58300 65.994 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu03g00738 Pkinase 6.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00738 - - gmx:100796171 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00738 03 6576020 6580650 Tsu03g00738 03 6576020 6580650 ECH
Tsu03g00738 03 6576020 6580650 Tsu05g03020 05 40612939 40615342 PCT