Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00734 ATGCATCTTTTAAAGAGCTGTTGCAAGAACGAAATTGTTTTCATCATCTTATGGTTCTGCTGCCATTTGATACTGGCTGCTGCGCAAGTTATCAATGTCACGGACCCTACTGAAGTGTTAGCATTGAGGAACATACATGAAAGTTTGGTTGATCCAAATGGACATTTGAGCAATTGGAATAGTGATGGAGACCCATGCCTATCTAACTGGACAGGAGTTGTGTGTAATGAAACAGCAGAAGAAAACTATCTACATGTTGTAGAATTGGAACTACTGAAAATGAACTTGTCTGGAAATTTGGCACCAGATATTGGCAACTTAACTTATTTGAAAAGATTGAATTTCATGTGGAACAAGATAAGTGGGAAAATTCCAGAGGAGATTGGCAATATCAAATCTTTGGAACTCTTgTTCCTGAGTGGAAATGAATTGACAGAACAAGTGCCAGAACAACTTGGGTCTCTTCCAAAACTACGTATAATGCAAATTGATGAAAACAAATTATCAGGACCTATACCTTTATCATTTGCAAAGTTGAACAATACAAAGCACTTTCACATGAACAATAACTCCCTTAGCGGGCAAATTCCAGCTGAACTTTCCAAATTACCAAACCTTATTCATCTCCTTCTGCAAAACAATAACTTGTCAGGAATTCTTCCACCTGAGCTATCCAAAATGCCAAACTTGACTATACTCCAACTCGACAACAATAACTTTGGCGGAAATAGCATTCCAGATGCTTATGCCAACATGTCAAAACTGGTGAAATTGAGCCTTAGAAATTGCAACTTGCAAGGACCAATTCCTGATTTAAGCCAGATACCACACCTCCTTTATATTGACCTCAGCTTCAATCAGTTGGATGAATCAATTCCTCCCAATAAGCTTGGTGAAAATATCACAACCATTATTTTATCGAACAACAATCTTACTGGAACTATTCCATCCAATTTTTCTCGTCTTCCACGTCTCCAGAAATTGTCGCTTGCTAACAATTTATTGAGTGGGAGTGTTCCTTCTACAATTTGGCAGAACAAGATTTCAAATGCTGCTGAAAGATTGCTATTAGAATTGCAAAATAACCAATTTATAAGCATATCAGGCAGTACTAACCTTCCTCCAAATGTCACACTCTTGCTTGATGGGAATCCCTTATGCTCAGATAACACACTGGATCAGTTCTGTAAAGTTGAAGGAGTTAGAAGTGAAACAAATGGCACATCACCAACAAACTTCAGTGATCCTTGCCCCAATCCAAGATGTTTACCTCCTTATGAATTCAATGTGAATTGTTTCTGCATGGTTccattgattattgattatcaATTGAGAAGTCCTGGTTTTTCATATTTCCTTCCATATTCCAATGCATTTGAGGAATACATGACTTCTCATCTTAAGTTACATGGCAATCAACTAAGCTATACTTTTGAGTGGCAAGTAGGGCCTCAAGTGGTAATGATATTGAAGCTTTTTCCTGAATATGTTGATAAAAATAGTTCCATTATTTTCAATTCAAGTGAGATCCAACGAATCATAAACATGTTCACTGGATGGATCATTCCTAACGTTGATTTATTTGGGCCTTATGACCTGAGGGACCGGATTCTTTATAATAATGGGATTAACACCTCTTCAAAATCAGACATAAGCACGGGTGCTTTGGTTGGCATAATCTTAGGCTCAATTGCGTGTGTAATATCATTGTCTGctgttttcattcttttaatATTAAGAACAAGATTAAGACGTTATGATGCAATTCCCAAGCCACATCATTCATCTAAGATCTCAATACAAATTGATGGCACAAGAGCCTTTACTTATGAAGAGTTGTCTGCTGCTACAAACAATTTTGACAACAATGCTCAAATTGGACAAGGAGGCTATgggaaggtttataaaggtattCTTACTAATGGCACTGTGGTAGCCATAAAGCGTGCACAGCAAGGATCACTGCAAGGTGAGAAGGAGTTCCTTACAGAAATATCAATACTATCAAGGTTACATCACCGTAATCTTGTGTCTTTGGTTGGATATTGTGATGAAGAAGGTGAACAgATGCTGGTTTATGAATATATGTCAAATGGCACACTAAGAGACCACCTTTCTGTTACATCAGTAAAGCCTTTGACTTTTGCTATGAGATTGAAGATAGCATTAGAATCAGCTAAAGGTCTCATGTATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTTAAGTCAACCAACATATTATTGGACTCTAAGTTCACTGCAAAAGTTGCAGATTTTGGACTTTCACGGCTTGCCCCAGTTCCAGATGTTCAAGGAATTATACCTGGTCATGTATCCACAGTAGTAAAGGGGACTCCGGGTTACCTTGATCCAGCGTACTTCTTAACTCACACGTTGACCGAAAAGAGTGATGTTTACAGTCTTGGTGTTGTATTTCTTGAACTTCTGACTGGGATGCATCCTATTTCACATGGCAAAAATATTGTTAGAGAGGTTAATGTTGCATACGAATCAGGTGAGATTTCTTCAATTATTGATGAACGCATGGGATCTTATCCATCTGATCATGCTGAGATGTTTTTAAATTTGGCCCTAAAATGTTCCGAAGACGAACCAGAACCACGTCCTAAAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGTTCTATGATGTCAGATTCAGATACCACGAGAGGTACATCTACAAGCACCGGTTCTCGCAAAACAGTCAGCTTTCTAGGCAGTACACCTTCTTCATCCTCAGTCATAAATACTCCTTCTGTATCAAGATATGTATAA 2814 0.3749 MHLLKSCCKNEIVFIILWFCCHLILAAAQVINVTDPTEVLALRNIHESLVDPNGHLSNWNSDGDPCLSNWTGVVCNETAEENYLHVVELELLKMNLSGNLAPDIGNLTYLKRLNFMWNKISGKIPEEIGNIKSLELLFLSGNELTEQVPEQLGSLPKLRIMQIDENKLSGPIPLSFAKLNNTKHFHMNNNSLSGQIPAELSKLPNLIHLLLQNNNLSGILPPELSKMPNLTILQLDNNNFGGNSIPDAYANMSKLVKLSLRNCNLQGPIPDLSQIPHLLYIDLSFNQLDESIPPNKLGENITTIILSNNNLTGTIPSNFSRLPRLQKLSLANNLLSGSVPSTIWQNKISNAAERLLLELQNNQFISISGSTNLPPNVTLLLDGNPLCSDNTLDQFCKVEGVRSETNGTSPTNFSDPCPNPRCLPPYEFNVNCFCMVPLIIDYQLRSPGFSYFLPYSNAFEEYMTSHLKLHGNQLSYTFEWQVGPQVVMILKLFPEYVDKNSSIIFNSSEIQRIINMFTGWIIPNVDLFGPYDLRDRILYNNGINTSSKSDISTGALVGIILGSIACVISLSAVFILLILRTRLRRYDAIPKPHHSSKISIQIDGTRAFTYEELSAATNNFDNNAQIGQGGYGKVYKGILTNGTVVAIKRAQQGSLQGEKEFLTEISILSRLHHRNLVSLVGYCDEEGEQMLVYEYMSNGTLRDHLSVTSVKPLTFAMRLKIALESAKGLMYLHTEADPPIFHRDVKSTNILLDSKFTAKVADFGLSRLAPVPDVQGIIPGHVSTVVKGTPGYLDPAYFLTHTLTEKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVAYESGEISSIIDERMGSYPSDHAEMFLNLALKCSEDEPEPRPKMAEVVRELENICSMMSDSDTTRGTSTSTGSRKTVSFLGSTPSSSSVINTPSVSRYV 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00734 937 Gene3D Ribonuclease Inhibitor 190 298 IPR032675 -
Tsu03g00734 937 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 915 - -
Tsu03g00734 937 ProSiteProfiles Protein kinase domain profile. 620 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00734 937 Gene3D Phosphorylase Kinase; domain 1 591 695 - -
Tsu03g00734 937 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Tsu03g00734 937 SMART LRR_typ_2 322 346 IPR003591 -
Tsu03g00734 937 SMART LRR_typ_2 203 226 IPR003591 -
Tsu03g00734 937 SMART LRR_typ_2 227 251 IPR003591 -
Tsu03g00734 937 SMART LRR_typ_2 275 300 IPR003591 -
Tsu03g00734 937 SMART LRR_typ_2 131 155 IPR003591 -
Tsu03g00734 937 CDD STKc_IRAK 626 892 - -
Tsu03g00734 937 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 915 - -
Tsu03g00734 937 Gene3D Transferase(Phosphotransferase) domain 1 696 912 - -
Tsu03g00734 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Tsu03g00734 937 SUPERFAMILY Protein kinase-like (PK-like) 594 889 IPR011009 -
Tsu03g00734 937 Pfam Protein kinase domain 622 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00734 937 Pfam Leucine rich repeat 300 344 IPR001611 GO:0005515
Tsu03g00734 937 SUPERFAMILY L domain-like 69 410 - -
Tsu03g00734 937 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Tsu03g00734 937 MobiDBLite consensus disorder prediction 897 937 - -
Tsu03g00734 937 Gene3D Ribonuclease Inhibitor 299 391 IPR032675 -
Tsu03g00734 937 Gene3D Ribonuclease Inhibitor 36 189 IPR032675 -
Tsu03g00734 937 SMART serkin_6 620 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00734 Tsu-Chr3 6520090 6531167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00734 20 901 Receptor kinase-like Gene Family AT5G01950 53.460 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tsu03g00734 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00734 - - gmx:100786467 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00734 03 6520090 6531167 Tsu03g00734 03 6520090 6531167 ECH
Tsu03g00734 03 6520090 6531167 Tsu05g03023 05 40645139 40653490 PCT