Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00725 ATGATAAATATCGTAAGTGAGTCTTGTGAATCTCTGCAAAATTTATGGAGCAGTAAAATAGAGGCACAAAATGGAGTTGCTGATATAAATATTGATAAGGATTTGAGAAGATTCTCTGGTAATGTTATTTCAAGAGCATGCTTTGGAAGTGATTATACCAAGGGGGAAGACATTTTCTTAAAACTTGGAGCTCTCCAAGAAATCGTTTGTTCCTGGAAAAATCTCTCTTCAGCAATTCCTGGCATGAGATACCTTCCAACAAATACCAATAGAAAAATATGGAAATTAGAAAAGGAAGTGAAAAGTTTGATACTTGAAGTGGTGAAgaatagaaaggaaaaaactAGTTTTGAAAAGGATCTACTGCAAATGGTTATTGAAGGTGCAAATAATAGTAATTTCACACAAGAGGCCAGCGACCGATTTATTATTGATAACTGCAGAAATATATACTTAGCAGGTTTTGAAACAACTGCAGTTGCTGCTACATGGTGTCTTATGTTATTGGCCTCGAATCATAGTTGGCAAGATCGCGCTCGCGCTGAGGTACTAGAAATTTGCAAGGGTAAAGTCCCGGATTTTGATATGCTTTCTAAGATGAAACAGCTGACAATGGTTATACATGAATCATTGCGCCTTTATCCACCAGTACCTTTAATGTCAAGGCAAGTTTTCAAGGACATGAAATTTGGGAATATTGATGTTCCAAAGGGCACTGACCTTTGGATATTGATTCTAACTATGCATACAAATCCTGATATATGGGGAGATGATGCCTACAAATTCAATCCAGAAAGATTTGCAAATGGAACTGCAAGTGCTTGTAAGCATCCACTTGTGTATATGCCATTTGGAGTTGGCCCAAGAATTTGTCTTGGACAAAACTTGGCCATGCTTGAACTTAAGATGCTTATAGCTCTCATTTTGTCAAATTTCTGTTTTTCACTATCTCCTAGATATGTACATTCACCTGCACATGGAGTTCTAATGAAACCTGACCATGGAGTCCAGCTCCTAGTAACAAAGTTataa 1032 0.3653 MINIVSESCESLQNLWSSKIEAQNGVADINIDKDLRRFSGNVISRACFGSDYTKGEDIFLKLGALQEIVCSWKNLSSAIPGMRYLPTNTNRKIWKLEKEVKSLILEVVKNRKEKTSFEKDLLQMVIEGANNSNFTQEASDRFIIDNCRNIYLAGFETTAVAATWCLMLLASNHSWQDRARAEVLEICKGKVPDFDMLSKMKQLTMVIHESLRLYPPVPLMSRQVFKDMKFGNIDVPKGTDLWILILTMHTNPDIWGDDAYKFNPERFANGTASACKHPLVYMPFGVGPRICLGQNLAMLELKMLIALILSNFCFSLSPRYVHSPAHGVLMKPDHGVQLLVTKL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00725 343 Pfam Cytochrome P450 2 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS P450 superfamily signature 205 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS P450 superfamily signature 153 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS P450 superfamily signature 291 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS P450 superfamily signature 282 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 284 293 IPR017972 GO:0005506|GO:0016705
Tsu03g00725 343 PANTHER CYTOCHROME P450 714C2 1 337 - -
Tsu03g00725 343 Gene3D Cytochrome P450 1 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 SUPERFAMILY Cytochrome P450 2 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 142 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 162 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 38 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 245 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 281 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PRINTS E-class P450 group I signature 291 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00725 343 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00725 Tsu-Chr3 6416061 6418674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00725 1 340 Cytochrome P450 AT5G24900 41.643 3.97e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00725 K24544 - gmx:100785420 536.569