Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00677 aTGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCTACAGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGCAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCagGGAAGTCATTGCTACCAGGGAAAGATTTGGAATGGTATTTTTTCAGCCCACGAGATAGGAAGTACCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACTGGGAAAGATCGTAAGGTGAATTCTCAAACTCGCGCAGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACCGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGTGACAATCCTTCCTCAGGCTTACAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATAGTCCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACTAGGCATTCAAATCATATTACAAGTGATCAACAATCATCAAGCATTGAGTTATATTCTGAAGGAGGAAGAGATGAAGTTTTAGAGAGCTCAAATTATTTGATGCCATGGGATGCAAACTCAACTCAAAACATAAATGGGAATAATACTTTCAATAACAATGGTGGAATGACAAGAGACAATGGAATCTGGACACAATTCTTATCTGAAGACTTGCTCAATCTTCCAACATCTTCCTCTTCATTTCCCAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAATGTGCAAGAATGCAACATAGGTTTTCCATGCCACCCTTGGAAGTGGAAGACTTTCCACATGTTGGTTTCAATTCTGAGCTGAAAATGACACAATTAGCCTCAAGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAAGAAATTCTATCTGTTGCTCAAGCTTCCCAAGAATTAATAAATCAACCAAACTATTCACATACATTTGGTGGCAATGAAAACTATGCAACTCATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATAATTACAATGTGAATGATCATATGAACTCCATGAGATATGATGACAAAGTATGGGAAGATCCAAACATGAGATCAATAGAGATTGGAGATCTTGATGATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCCAAACAAACAGGAAAGAGAATGAGGTGCaagTAGAATCTGAGCAACAAAATATCAACAAAGAAATCAATGACACTAACATTGGTAATTTCTCAATGGAATTTATCAATGATAATGATGACCCAAATGAGAATTTTATTGATGATAGTAACATTGATTATTCAAATTCTACAAGCTATGAAGttgttgaagaaacaacaaaagttAGTCATGGAATGTTTGTTGCTACACGACAAGTAGCTGACacattttttcatcaaataaCTCCTTCACAAACAATCAAAGTTCAACTCAATCCAATTAtggaaaacaaaaaatctatAGAGAATGAAGAAACATTGATTATACCAAAGAAACAAGGGTACCCTTTCTTAAGGAAATTTAAGGCCAATTTGATTGATTACATGAAAAAGCCATCAAAGACAATAGTAAGTGCTATTGTTTTTATGTTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTTGAAGATATGAAGCCAAAGTCAAAATATGTGAAAAGGAAATGTTGCTATGGAGCTAATAATAGCATGAAGAAAATAATTTGGAAGGAGCAAGAAAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGATGTGGTATTGAAGAAGATAGGAATTTTCCTCACTATATCTTTGGCTCTTTGTACTATGTGGGCTAACCATATGATAGTTTGTGCTTGA 2031 0.3535 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSSGLQDAYALCRIFKKSTVIVPKVGEQYVNNVTRHSNHITSDQQSSSIELYSEGGRDEVLESSNYLMPWDANSTQNINGNNTFNNNGGMTRDNGIWTQFLSEDLLNLPTSSSSFPNYGSTPNYPPSKVDIALECARMQHRFSMPPLEVEDFPHVGFNSELKMTQLASSSMSGTRNETDILQEILSVAQASQELINQPNYSHTFGGNENYATHHENDFTFMVGNNNYNVNDHMNSMRYDDKVWEDPNMRSIEIGDLDDEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFQTNRKENEVQVESEQQNINKEINDTNIGNFSMEFINDNDDPNENFIDDSNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPIMENKKSIENEETLIIPKKQGYPFLRKFKANLIDYMKKPSKTIVSAIVFMFALFLVLCVYLKEQVEDMKPKSKYVKRKCCYGANNSMKKIIWKEQEKIWFVGIKSGKGFDVVLKKIGIFLTISLALCTMWANHMIVCA 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00677 676 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 409 - -
Tsu03g00677 676 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Tsu03g00677 676 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Tsu03g00677 676 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Tsu03g00677 676 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Tsu03g00677 676 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00677 Tsu-Chr3 5984408 5988936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00677 1 667 NAC Transcription Factor Family AT1G65910 44.767 2.66e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu03g00677 NAM 7.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00677 - - gsj:114381841 933.71