Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00668 ATGCCCTTGGAAGGGATTTTCATTGAACCAACTTCAACACCACCTGATCTTTCTCTTCATATAAGTCCACCAAGTACTTCTTCATCTTTGATTTGCAACAATAACTCAACTCATCAAGTTCTTAATTATGAAGCTCACAATTCATCAAGTACTAATTTCATTTCTTCGAGAACTTTGGCTCAGGCTCACACTGAACTATCTCTTGGAAGAAATTTTAGCGGCGGTGTTAGTGGTGGAGCTCAAGAACAACCACAACcactacaacaacaacaacaacataaccCTTACTTTCCTCACCTCCAACATCATCACAACtctacaacttcaacaacaacaccaataaGTACAAGTCCTAATTCAACTCACATGAATCACATAAATTATGGTGTTTCATTGCTTGAtatgtcatcatcatcatcggaAGCTTTGAGACCGATTAAAGGGATTCCGGTGTATCACAACCGTTCATTTCCTTTTTTACCGGCCATGGAACATTCAAGAGAAAAAGATCCCAAGATGTGTTTATATCACCACATGCCTAATTCGCCAACACCGTCTCCTTCATCGTCATCACCTCTTTCCCCCTACATCACTGCAGGAGGTTTAGATCCCATGTCGTTTTTAAACTCTAGTGGCTCTGCAGCGGCTTATAGAGCCGCTGTAGCCACAAGGTTTAATAACGAACCTTTCAAATCTCATCAATATCCATTGCACCATCATCACCACCATCACTCACACTACGCTAGTGTTGGACTTGGAAGCTCAGAAGCATCTATGATGAGATCAAGGTTTTTGCCAAAGTTACCGACAAAGAGAAGCATGAGAGCTCCACGAATGCGATGGACGAGTACTCTCCATGCTCGATTCGTTCATGCTGTTGAGCTCCTCGGCGGCCATGAAAGAGCAACACCAAAGTCAGTTTTGGAACTAATGGATGTGAAAGATCTCACATTAGCTCATGTAAAAAGTCATTTGCAGATGTATCGAACTGTTAAGACAACTGACAAACCTGCAGCTTCTTCAGGCTTTTCAGATGGATCTGGAGAAGATGATGTGCCTCAAATTGGAAACAATGGCGGAATTCGACAATTTTCAGACCAAAGAGGGTTAACAGATCGGCCATTACAACAAGATATGGATTACTCTTCCAACACTTTATGGAGTAACTCTTCAAGTAGTAGAGAACCATGGCCACCAACTAGTTCTAATGACGTAGATGGTTTCAGACCAACTATCTTCCAATCACAACCAATATCAGGAGGGCATCAAATTCAGGAATGTGATTCAAATCAACTGAAGAACAATTTGTCAGGATCTAATTTAGAGTGTAAGAACCCAAGCTTGGAGTTCACATTAGGCATACCAGATTGGAATGGCAAAGGACAAGCTTAA 1392 0.3937 MPLEGIFIEPTSTPPDLSLHISPPSTSSSLICNNNSTHQVLNYEAHNSSSTNFISSRTLAQAHTELSLGRNFSGGVSGGAQEQPQPLQQQQQHNPYFPHLQHHHNSTTSTTTPISTSPNSTHMNHINYGVSLLDMSSSSSEALRPIKGIPVYHNRSFPFLPAMEHSREKDPKMCLYHHMPNSPTPSPSSSSPLSPYITAGGLDPMSFLNSSGSAAAYRAAVATRFNNEPFKSHQYPLHHHHHHHSHYASVGLGSSEASMMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGFSDGSGEDDVPQIGNNGGIRQFSDQRGLTDRPLQQDMDYSSNTLWSNSSSSREPWPPTSSNDVDGFRPTIFQSQPISGGHQIQECDSNQLKNNLSGSNLECKNPSLEFTLGIPDWNGKGQA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00668 463 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 463 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tsu03g00668 463 Gene3D - 276 333 - -
Tsu03g00668 463 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 463 - -
Tsu03g00668 463 MobiDBLite consensus disorder prediction 358 408 - -
Tsu03g00668 463 MobiDBLite consensus disorder prediction 332 408 - -
Tsu03g00668 463 SUPERFAMILY Homeodomain-like 274 330 IPR009057 -
Tsu03g00668 463 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 277 330 IPR006447 GO:0003677
Tsu03g00668 463 MobiDBLite consensus disorder prediction 70 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00668 Tsu-Chr3 5873426 5879578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00668 1 460 G2-like Transcription Factor Family AT5G16560 41.463 8.96e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu03g00668 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00668 - - ccaj:109796302 583.178