Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00614 ATGGAGAACTTGTTGGGTTTGCTCAAAATTCATGTTCAAAGAGGAGTCGATCTTGCTGTCAGAGATGTAGTTAGCAGTGATCCttatgttatcatcaaaatggGAAAACAGAAGCTGAAGACTAAGGTAGTGAAGAAGAATCTGAATCCTGAGTGGAATGATGACTTGACTTTATCCATTTCAGATCCTCATACGCCAATTCATCTGCATGTGTATGATAAGGACCGATTTAGCTTGGACGACAAAATGGGGGACGCTGAGTTCGACATTGGTCCATTTGTTGAAGCGATAAAGATGCGTTTGGAAGGTCTCCCAAATGATACTATAGTTACAAGAGTGCAACCTAGCAGAAAAAATTGCTTAGCAGAAGAGAGTCACATTGTTTGTAAAGATGGCAAAGTTTCGCAAAACATGGTTCTTCGACTAAGAAATGTTGAATCTGGTGAAGTAGAGCTTCAATTGCATTGGATTGACATTCCTGGTTCAAGGGGTCTCTAG 498 0.3936 MENLLGLLKIHVQRGVDLAVRDVVSSDPYVIIKMGKQKLKTKVVKKNLNPEWNDDLTLSISDPHTPIHLHVYDKDRFSLDDKMGDAEFDIGPFVEAIKMRLEGLPNDTIVTRVQPSRKNCLAEESHIVCKDGKVSQNMVLRLRNVESGEVELQLHWIDIPGSRGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00614 165 CDD C2_ArfGAP 5 148 - -
Tsu03g00614 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Tsu03g00614 165 Gene3D C2 domain 4 160 IPR035892 -
Tsu03g00614 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Tsu03g00614 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Tsu03g00614 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Tsu03g00614 165 SMART C2_3c 7 102 IPR000008 -
Tsu03g00614 165 Pfam C2 domain 7 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00614 Tsu-Chr3 5346810 5349053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00614 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 1.03e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00614 - - gmx:100793531 284.648