Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00593 ATGGCTTGCTGCTTTAGGGTCAAAGCTGAGACTGATCTTACACATGATGGTTTGAATTCAGAGGTTCTAACTTCAAGTACTGAGAGTGAGATATTACAATCCAACAATATTTTGAAGTGTTTCACATTCAATGAGTTAGAAACTGCTACAATGAACTTTCATCTAGATGGTCTATTGGGTAAAGGTGAGATGATTAAGGGGTGGATTGATGAACACACACTAGCCCCTACTAAACCAGACGATTTCTGCCAGATTTTGGTATACGAATTTTTTACCAAGGAAAGTTTGGACAAGCATTTGTCTAGAACAGAAACTTCTAACTTTAAGCCACTCACTTGGAAAATCCGTATGAAGATAGCTCTTGATGTTGCTAAGGGTCTTGCATATCTTCATAGTGATGAAGTGAAAATGATAGTTGGAGACTTCAAAACTTCTAAAATCTTGATTGATTCTAATCACAATGCAAAACTATATAATTTTGCGATGATAAAAGATAGACGATATGAAGATACCATCGACCCAGATATGATTTATGAGCGAGGCTCACAAACATACACAGCACCTGAGTGTCGCCTAACGAAAGAGGGTGATGTATACAGTTTTGGCGTTGTTCTGCTGGAAATTATGTTAGGAAAACGCGCATATGATAGTACTACCAGGCCATCTCGGAAACGTAATTTAGTTGAATGGGCCAAACCATTACTTATCAGAAAACACAGGACCTCTGAAACCATGGATGATCTTATAGAAGGCCAATATTCATTGCCTGAAGCAATGAAAGTAGCTCACATTGTAATTCAATGTCTGTCTAAAATAGCAGAAGATAGACCAAACATGAATGAGGTGGTGAGATCTTTGGAAGAACTTAAGTATTCCAATGACACAATTGGTGGAGTAGGGAGCTCTTAA 909 0.3795 MACCFRVKAETDLTHDGLNSEVLTSSTESEILQSNNILKCFTFNELETATMNFHLDGLLGKGEMIKGWIDEHTLAPTKPDDFCQILVYEFFTKESLDKHLSRTETSNFKPLTWKIRMKIALDVAKGLAYLHSDEVKMIVGDFKTSKILIDSNHNAKLYNFAMIKDRRYEDTIDPDMIYERGSQTYTAPECRLTKEGDVYSFGVVLLEIMLGKRAYDSTTRPSRKRNLVEWAKPLLIRKHRTSETMDDLIEGQYSLPEAMKVAHIVIQCLSKIAEDRPNMNEVVRSLEELKYSNDTIGGVGSS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00593 302 PANTHER APK1B, PUTATIVE-RELATED 38 79 - -
Tsu03g00593 302 Pfam Protein tyrosine and serine/threonine kinase 84 286 IPR001245 GO:0004672|GO:0006468
Tsu03g00593 302 SUPERFAMILY Protein kinase-like (PK-like) 32 289 IPR011009 -
Tsu03g00593 302 Gene3D Transferase(Phosphotransferase) domain 1 92 297 - -
Tsu03g00593 302 PANTHER APK1B, PUTATIVE-RELATED 84 288 - -
Tsu03g00593 302 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00593 302 PANTHER OS01G0588500 PROTEIN-RELATED 84 288 - -
Tsu03g00593 302 PANTHER OS01G0588500 PROTEIN-RELATED 38 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00593 Tsu-Chr3 5136515 5138492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00593 34 302 Receptor kinase-like Gene Family AT3G58690 32.602 2.41e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu03g00593 PK_Tyr_Ser-Thr 3.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00593 - - gmx:100800735 275.789