Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00592 ATGTTCTTGGCTTGCTGTTTTAGTTCAAAGGTCAAAGCTGAATGTCCTACACATAATGTATCAAAGGTTGGTAGGAGAGAAGAGGATGATTTGAGTGGTTTAAGCAAAAAGGGATGCTGTTCATCTATGACTGACAGTGAGATATTTCAATCCAATAAATTGAAGTGTTTTACATTCAATGAGGTAAAAACTGCTACAAGAAACTTTCGTCCAAGTGGTCTAGTCGGCAAAAGTGGATTTGGTTATGTATATAAGGGGTGGATCGATGAAAACACACTAGCCCCTACTAAACTAGGAACTGGTTTCGTCGTTGCTGTGAAGACACTTAACCAAGAAAACAACCAGGGACAAAGTGAATGGTTGACAAAAATCAATTACTTAGGACAGCTACATCATCCTAATCTTGTGAAATTGATCGGTTACTGCTTCGAGGATAACAATCGGATTTTGGTATATGAATTTTTATCAAAGGGGAGTTTGGACAATCATTTGTTTAGAAGGATTTCTAACTTTGAGCCACTCTCATGGAAAATTCAAATGAAGATAGCTCTTGATGCTGCTAAGGGTCTTGCATTTCTTCATAGTAATGAAGTGGAAGTGATACATGGAAGCTTCAAAACTTCTAAGATCATGATTGATTCAAACTATAATGCGAAATTATCCGATTTTGGGTTGGAAAAATATGGATCAGAAGATGATAGGATCGAATCGGAAAAGGAATATGCACAGATTTACGCAGCACCTGAGTTTATAGCCACAGGTGGTCTAAGCAAAAAGAGTGATGTATACAGTTTTGGAGTTGTTCTCCTGGAAATTATGTCCAGCAAACGTGCATTAGATAAAAATAGGCCGTTTGTGGAACATAATTTAGTTGCATGGGCAAAACCATCACTCAAACGGAAAAGTTCTCGAGCCATAATATTCGTCGCGTGA 933 0.3783 MFLACCFSSKVKAECPTHNVSKVGRREEDDLSGLSKKGCCSSMTDSEIFQSNKLKCFTFNEVKTATRNFRPSGLVGKSGFGYVYKGWIDENTLAPTKLGTGFVVAVKTLNQENNQGQSEWLTKINYLGQLHHPNLVKLIGYCFEDNNRILVYEFLSKGSLDNHLFRRISNFEPLSWKIQMKIALDAAKGLAFLHSNEVEVIHGSFKTSKIMIDSNYNAKLSDFGLEKYGSEDDRIESEKEYAQIYAAPEFIATGGLSKKSDVYSFGVVLLEIMSSKRALDKNRPFVEHNLVAWAKPSLKRKSSRAIIFVA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00592 310 ProSiteProfiles Protein kinase domain profile. 69 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00592 310 SUPERFAMILY Protein kinase-like (PK-like) 48 296 IPR011009 -
Tsu03g00592 310 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Tsu03g00592 310 PANTHER KINASE 1B 40 302 - -
Tsu03g00592 310 Pfam Protein tyrosine and serine/threonine kinase 75 275 IPR001245 GO:0004672|GO:0006468
Tsu03g00592 310 PANTHER OS01G0588500 PROTEIN-RELATED 40 302 - -
Tsu03g00592 310 Gene3D Transferase(Phosphotransferase) domain 1 155 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00592 Tsu-Chr3 5133651 5135687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00592 45 302 Glycoside Hydrolase AT3G07070 44.061 1.85e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu03g00592 PK_Tyr_Ser-Thr 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00592 - - gmx:106795104 396.741