Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00591 ATGATGATGGGTTGCTGCTTTAGTGCAAAGGTCAAAGCTGAGAGTCCTACACATAATGGTTTGAATTCAAAGGCTGGTGGGAGAGAAGAGGATGTTTCGGGCGGTTTAAGCAGAAAGGCTTCTTCTCCACATTTGCTTTTAACTTCTAGGACTGAGGGTGAGATATTGCAATCCATCAATTTGAAGTGTTTCACAATCAATGAGATAAGAACCGCGACAAGGAACTTTCGTCCAGATAGTATGGTCGGTGAAGGTGGATTTGGTTCCGTATTTAAGGGTTGGATCGATGAGCACACACTAGCCCCTACTAAACCAGGTACTGGTTTTGTCATTGCTGTCAAGAGGCTTAACCAAGAAAGCAGTCAGGGACATAGTGAATGGTTGACAGAACTCAATTACCTTGGACAGCTTCGTCATCCTAATCTTGTGAAATTGGTTGGTTACTGCTTAGAGGATGATTACCGGATTTTGGTATATGAATTTGTGACAAAAGGAAGTTTGGATAATCATTTGTTTAGAAGAGCTTCTTACTTTCAGCCACTCTCTTGGAAAATCCGAATGAAGATAGCTCTTGATTCTGCTAAGGGACTTGCATTTCTTCACAGTGATGAAGTCGAAGTGATATACCGAGACTTCAAAACTTCTAATATCTTGATTGATTCTGACTATAATGCAAAACTCTCTGATTTTGGGATGGCAAAAGACGGACCAGAAGGCGGTAAGAGCCATGTCTCTACAAGGGTAATGGGCACCCCAGGTTATGCGGCTCCTGAGTATCTAGCCACAGGTCACCTAACCAAAAAGAGTGATGTATACAGTTTCGGAGTTGTTCTTTTAGAAATTATGTCGGGAAAACGTGTATTGGATAAAAACAGGCCAACTAAGGAGCATAATTTAGTTGAATGGGCGAAACCATTACTCATGAGTAAACGCAAAATCTTTCAAGTCATGGATGCTCGTATAGAAGGTCAATACTCGTCGCGTGAAGCAATGAAAGTAGCTCAGATTGCAATTCAATGTATGTCAGTAGAACAAAAATATAGACCAAACATCGATGAGGTGGTGAGATCATTGGAACAACTTCAGGATTCTAATGACAAAACAAATGGTATTAGTTCAAGTAGTAGTGGCTTAGATCAACGCGGAAAAAGTGTCGATGAATCATTAACCGGAGAAGGTAGTTCTAATATCAGTTCATCTGCTTCTCCTCTTCATAATTAG 1221 0.407 MMMGCCFSAKVKAESPTHNGLNSKAGGREEDVSGGLSRKASSPHLLLTSRTEGEILQSINLKCFTINEIRTATRNFRPDSMVGEGGFGSVFKGWIDEHTLAPTKPGTGFVIAVKRLNQESSQGHSEWLTELNYLGQLRHPNLVKLVGYCLEDDYRILVYEFVTKGSLDNHLFRRASYFQPLSWKIRMKIALDSAKGLAFLHSDEVEVIYRDFKTSNILIDSDYNAKLSDFGMAKDGPEGGKSHVSTRVMGTPGYAAPEYLATGHLTKKSDVYSFGVVLLEIMSGKRVLDKNRPTKEHNLVEWAKPLLMSKRKIFQVMDARIEGQYSSREAMKVAQIAIQCMSVEQKYRPNIDEVVRSLEQLQDSNDKTNGISSSSSGLDQRGKSVDESLTGEGSSNISSSASPLHN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00591 406 PANTHER KINASE 1B 30 368 - -
Tsu03g00591 406 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Tsu03g00591 406 Gene3D Transferase(Phosphotransferase) domain 1 162 380 - -
Tsu03g00591 406 MobiDBLite consensus disorder prediction 362 406 - -
Tsu03g00591 406 PANTHER OS01G0588500 PROTEIN-RELATED 30 368 - -
Tsu03g00591 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tsu03g00591 406 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Tsu03g00591 406 SUPERFAMILY Protein kinase-like (PK-like) 49 358 IPR011009 -
Tsu03g00591 406 MobiDBLite consensus disorder prediction 15 39 - -
Tsu03g00591 406 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g00591 406 CDD STKc_IRAK 82 361 - -
Tsu03g00591 406 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00591 Tsu-Chr3 5129610 5132606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00591 54 358 Glycoside Hydrolase AT3G07070 45.752 6.22e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu03g00591 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00591 - - gmx:100800735 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00591 03 5129610 5132606 Tsu03g00591 03 5129610 5132606 ECH
Tsu03g00591 03 5129610 5132606 Tsu05g03202 05 43222541 43224796 PCT