Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00568 atgTCTCTATTGCTCATTGCATTCTCTAGTTTTATATTATCTATACTAATATACCAATTTGTGAAATTTGTAACAAAATCTTCTTCACTATCACTTCCACCTGGACCAAAACCATGGCCCATAATAGGTAACATGCCAGACTTAGGCCGTGTTCCACATCATTCTCTTGCAGCCTTGGCTAAAACCTATGGCCCTTTGATGCACCTCAAATTGGGCTTTGCGGATGTTATCGTGGCAGCTTCAGCCTCTGTGGCCGAACAATTCTTAAAGGTTCATGATGCTAACTTTAGTAGTCGGCCGCCTAATGCTGGAGCTAAATACATGGCTTATAACTATCAGGATCTTGTGTTTGCTCCTTATGGTCCTCGGTGGAGATTGCTCCGAAAAATATCCTCCGTTCATCTCTTCTCCAACAGAGTCATGGATGAATTCAAACATTTGCGTCAGGAAGAGGTAGCAAGATTGACAAGCAATTTGGCAAGTAACTATTCCACCACAAAAGCAGTGAACTTAGGACAACTATTGAATGTTTGTACAACAAATGCACTTGCTAGGGTTATGTTAGGAAGGAGAGTTTTCAATGATGGTAATGGTGGTAGTGACCCTAAAGCTGATGAGTTCAAGTCTATGGTTGTTGAAATGATGGTGTTAGCTGGAGTATTCAATATAGGTGATTTTATTCCTGCATTAGAATGGTTAGATATTCAAGGAGTTCAAggtaaaatgaaaatattacacAAGAGATTTGATgcatttttaacaaatattattGAGGAACATGAAACTTCAAATTCTAAAAGTGAGAAACATAAGGATTTGTTGAGTACTTTGTTGTCACTTAAAGAAGAAACGGATGATGATGGAAACAAACTCACTGATGTTGAGATTAAAGCACTTCTTTTGAACATGTTTGCAGCGGGGACAGACACATCAGCAAGCACAACAGAATGGGCCATTGCAGAACTACTCAAAAACCCAAGAATCTTAGCCCAAGTTCAGCAAGAATTAGACAATGTCGTGGGTCGAGAAAGGAATGTGAACGAAGATGATATACCTAATCTACCTTACTTACAAGCAGTGATAAAAGAAACATTTCGCCTACATCCATCAACACCTCTTTCGCTTCCACGAATTGCATCTGAAAGTTGCGAGATTTTTGGGTACCACATTCCAAAGGGTTCAACTCTTTTGGTTAATGTATGGGCTATAGCGCGTGACCCAAAAGAATGGAATAACCCATTAGAGTTCAACCCCGAAAGATTCTTACCCGGTGGTGAGAAGTGTGATGTTGATATTAAGGGaaataattttgaagttataCCTTTTGGTGCTGGACGTAGAATATGTGCTGGGATGAGTCTTGGACTTCGTATAGTCCAACTTCTAACTGCTACATTGGCTCATTCGTTTGATTGGGAACTTGAAAATGGGATCAATGCTGAAAAATTGAACATGGATGAAGCTTACGGGCTTACTCTTCAACGGGCTGTGCCATTATCGGTTCATCCTAAACCCAGACTCTCGCCACATGTGTACTCGTCATGA 1545 0.3922 MSLLLIAFSSFILSILIYQFVKFVTKSSSLSLPPGPKPWPIIGNMPDLGRVPHHSLAALAKTYGPLMHLKLGFADVIVAASASVAEQFLKVHDANFSSRPPNAGAKYMAYNYQDLVFAPYGPRWRLLRKISSVHLFSNRVMDEFKHLRQEEVARLTSNLASNYSTTKAVNLGQLLNVCTTNALARVMLGRRVFNDGNGGSDPKADEFKSMVVEMMVLAGVFNIGDFIPALEWLDIQGVQGKMKILHKRFDAFLTNIIEEHETSNSKSEKHKDLLSTLLSLKEETDDDGNKLTDVEIKALLLNMFAAGTDTSASTTEWAIAELLKNPRILAQVQQELDNVVGRERNVNEDDIPNLPYLQAVIKETFRLHPSTPLSLPRIASESCEIFGYHIPKGSTLLVNVWAIARDPKEWNNPLEFNPERFLPGGEKCDVDIKGNNFEVIPFGAGRRICAGMSLGLRIVQLLTATLAHSFDWELENGINAEKLNMDEAYGLTLQRAVPLSVHPKPRLSPHVYSS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00568 514 Pfam Cytochrome P450 33 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Tsu03g00568 514 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 504 - -
Tsu03g00568 514 Gene3D Cytochrome P450 21 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PANTHER FLAVONOID 3'-MONOOXYGENASE 8 504 - -
Tsu03g00568 514 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g00568 514 SUPERFAMILY Cytochrome P450 33 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00568 Tsu-Chr3 4875885 4880863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00568 2 513 Cytochrome P450 AT5G07990 67.641 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00568 K05280 - gmx:547475 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00568 03 4875885 4880863 Tsu03g00568 03 4875885 4880863 ECH