Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00553 ATGGCTGCAAAGCTTCTACATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGATGTATGACTGGAATTTTTCAACTCTTTGATCGTCATCAGATGCTCACGGCTCGTCGGATTAGTCAGAAGAGGCTTCCTTCTTCTGGTAATTTGCACTTCAATGATGGCAGCTTCGAAAGAGATTCTGATAGCATACAgcatcaacaacaaatggcaaCTGAATCAAGCTTAAACCGAGGACTGAATGACAAGCAAAGAATTTCAACAGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCGTCAGTGTCCTCTTTGGACTTTAAGGCTGAAGTAGAGACTTCATTTGAAACTCCTACAAGGGACACATTTATGAACCAACCCGCTATCTCTCCCCGTTTTGGACGGCACTCCCTTGACCTGCGTGATGTTGTGAAGGATTCTATGTACAGGGACCCTCGAGGGCCGTCTGCAAAATCTACAGCCAAAGATCAATCTTCCGTTGGTGGTGTCAAGCACAGGGATTCTCCGCGACCTCTTCAGATGTCGAAATATGCTGATAGATCTTACGGAGTTGAAATAGATGAAAAGCAAAGTGTGCCTATTGATCTAAAGGAGTCGATCCGAGTCCTTTCTAAACTTCGAGAAGCACCTTGGAATTACACAGAAAGTACTAGAGAACTTCCGAGATCGTCACATGAAGTAAGAGATGGACACTGGAATTCAGTTTCGAAGGATGCTCCTTGGTTAGCTTATGATGGAAGAGAAACAAGTCGTTTATCTTTTGAATCACGAGAGACGATCAAATCCACACCAAAGCTAAAAGAGTTTCCAAGGCATTCACTGGATAGTAAGGAAGGTTCGTGGCGCAATTATAACTCCGATTCAAGGCCTAGCAACATCTCAAGAAATGCTTATGGTGCCACCTCCACCTCCAATGAAAAATTCTCAAGTCCACAACAGTCTTCATCAGCACAGAATCGGCTACCGAGTGTTGTCGCAAAACTAATGGGCTTGGAAGCATTACCTGATTCCTCTTCGGTTGGTGATACTCAATCAGGTTCAACAGAAACTTACTCTGCTCAAGATAACGGCCAGTTTCCAAGACCATCGAAAAATGGATTCATTAGACCTCTTCGAGTTTCTAACTCTCCGAAAATCTCATTGAAAGATCCAACTTCCCCTAGGCGGAAGAATCCTGACGTGGTTATGAAACCGGTCTCAAGTTCAAAGTTTCCAATTGAACCAGCACCATGGAAGCAGCATGATGCAAATAGAAACTCTCAGAAACAAATTTTAAGGACAACAAAAGTTCCATTAAGAACACAAGATTCATTTCCTTCGGTTTATAGTGAGATAGAGAAGCGATTGAAGGACCTTGAATTCAAACAATCCGGAAGGGATCTTAGAGCACTAAAGCAGATACTAGAAGCAATGCAAGAAAAGGGACTGTTAGAGAGCCGTAAAGAAGAACAAGTTCCAAACGTAGTTGGAAGTCGAAGTGACTATGAACCTAAAGCTAGCAATCTAAATCAGAACTCAAGGTTGGCAAAGCAACAAAATCCTCAGAGAAACAATTTTCTGTCTTCTACATTCAAGGGAAATGATTCCGCAAGAGCTTTTGATTCTCCAATAGTGATAATGAAACCGGCAAAACTTGTGGAGAAATCTGAGATTTCTGCTTCTTCAGCTATTCCAATAGGTGGCTTTTCTGGTTCCAATAATAGAAACAACATATCTTCTACTCTACTAGCAAGAGAACAGTCTCCAAAGAATATTCGGAGGGACGCTTCTCCGAGTTCCACCGATAAGAAAACAAGTATTACAAAGACTACTCGATCTTTACATATTCAATCAAGGTCAAACCAATTTCCAAAAGAAAGCCAAAGTTCAGGGAAGAGTTCAGGATCAGTGAGTCCAAGATTGCAACAGAAGAAGTTGGAGTTAGAAAAGCGATCTCGTCTGCCTACACCACCATCAGATTCAAACAAACCAAGAAGGCAATCCAGTAAAAAGGCAGCCGAATCAGTTTCCCCAGGTGGAAAAGTACGACACAAAACTGTCAACTCACAGAACAGTGAAGAGCAACTGAGTGAGATAAGCAATGATTCCAGAAGTTTTTACCAAGGGGATGAAATTTCTGTTCAATCTGACAGCATCACCGTTGACTCGAAATTGGATATTGAAGTCACTAGTAGTTTACGGTCTTCTGAAATTGATGACAGCCAAAGTCCATCCTTGAAGGCTATGAAGAAATTGGTTTCAGAAACAGTTCAGAAAAAATCAACACCAAGGTTGGATCAGGATGAAACAATCGCAGAACTTGCATCTATGGGACCGGAACATCCAAGTCCTAACTCCGTTCTTGATGCATCGGTATACAAAGATGACGTGCAATCGCCAGTAGTGCAGACACCTAACGATCCAAAAGGTAATTTAATGTCCGCATTTCATATTCTTGTTGTTTCACAATGA 2478 0.4132 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQMLTARRISQKRLPSSGNLHFNDGSFERDSDSIQHQQQMATESSLNRGLNDKQRISTESSRASFSSCSSSVSSLDFKAEVETSFETPTRDTFMNQPAISPRFGRHSLDLRDVVKDSMYRDPRGPSAKSTAKDQSSVGGVKHRDSPRPLQMSKYADRSYGVEIDEKQSVPIDLKESIRVLSKLREAPWNYTESTRELPRSSHEVRDGHWNSVSKDAPWLAYDGRETSRLSFESRETIKSTPKLKEFPRHSLDSKEGSWRNYNSDSRPSNISRNAYGATSTSNEKFSSPQQSSSAQNRLPSVVAKLMGLEALPDSSSVGDTQSGSTETYSAQDNGQFPRPSKNGFIRPLRVSNSPKISLKDPTSPRRKNPDVVMKPVSSSKFPIEPAPWKQHDANRNSQKQILRTTKVPLRTQDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQVPNVVGSRSDYEPKASNLNQNSRLAKQQNPQRNNFLSSTFKGNDSARAFDSPIVIMKPAKLVEKSEISASSAIPIGGFSGSNNRNNISSTLLAREQSPKNIRRDASPSSTDKKTSITKTTRSLHIQSRSNQFPKESQSSGKSSGSVSPRLQQKKLELEKRSRLPTPPSDSNKPRRQSSKKAAESVSPGGKVRHKTVNSQNSEEQLSEISNDSRSFYQGDEISVQSDSITVDSKLDIEVTSSLRSSEIDDSQSPSLKAMKKLVSETVQKKSTPRLDQDETIAELASMGPEHPSPNSVLDASVYKDDVQSPVVQTPNDPKGNLMSAFHILVVSQ 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00553 825 MobiDBLite consensus disorder prediction 344 428 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 346 370 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 488 535 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 222 241 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 288 328 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 603 643 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 41 56 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 150 185 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 272 287 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 64 98 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 503 535 - -
Tsu03g00553 825 Pfam DUF761-associated sequence motif 318 348 IPR032795 -
Tsu03g00553 825 PANTHER LONGIFOLIA PROTEIN 1 808 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 586 706 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 41 98 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 272 328 - -
Tsu03g00553 825 MobiDBLite consensus disorder prediction 684 706 - -
Tsu03g00553 825 PANTHER LONGIFOLIA PROTEIN 1 808 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00553 Tsu-Chr3 4682180 4687855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00553 135 803 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 42.213 2.03e-109 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00553 - - gmx:100805643 1112.83