Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00483 ATGGTTAGCATTAAAAGTTCTTACACTGTGATTCCAGAAGAACCAACACCACAAGGTCGTTTATGGCTCACTGACAAAGACCAAGTAGCAACTAAACATCACACAAACACCATTTACatttacaaaccaaaacagaacCAAGAAAATGTCATAGAAACATTGAAGAACTCTCTAAGCAAAATTCTAGTTTACTACTATCCTATAGCTGGTAGATTGTGTTACTCAAAAGAAGGTGATGGTAGACTAGAATTGAATCTCAATGCCAAAGGAGTCATTTTGCTTGAAGCTGAAACCACAAAAACAATTCATGATTATGGTGACTTTGCACCTTCTGATTCAACCAAAGAGCTTGTTCCAATAGTCAATTACAATCAACCCTTTCAAGAAATGCCACTTCTTCTTGTGCAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCAATTGGTGTTGCTTTATCCCACTCTTTAACAGATGGAATTGGAGCTGGTGGATTCATCAACTCATGGGCGAAAATAGCACGCGGCGAAACCCTAGAGCCTAATGATTTACCCTTTCTTGATAGAACAATAATCAAATTTTCACACACACCATCGAAAGTACCGCGTTTTGAGCACATCGAATTGAAGCCTCTTCCACTCATTCTAGGAAGAAAAGAtacaagtgaagaaagaaagaaaaaaacagtaGGAACAATATTGAAACTCTCATATGATCATGTTgagaagttgaagaaaaaagCCAATGAATTTTTATCAATGGAGAAAAAAGAAGGGTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATCTATGGAGATGTGCATCTAAGGCACGTGGTCTTGAAGATAATCAAGAAAGTGTTGTTAGATTTCATGCTGATATTAGAAAAAGAATTATTCCACCACTTCCTCAAAACTTTTTTGCTAATGCTTTGGTACTAACAGCAACAAAAGGATATATTGGAGAAATCACATCAAAGCCTTTAGGCTATGTGGCACAAAAGATAAGGGAAGGAACTGAGATTGTTAAagatgattttataaaatcacaaATTGATGTTATTAGAAGTTATAAAAATATGAGTGATGCAATGCAATTGTTTCTTGGTGATGAATATGAAAAAGCACCATATTTTGGGAATCCAAATTTTCAAATAGCTAGTTGGACAGGAATTCCATTTTATGAAACTGATTTTGGATGGGGGAAGCCTATTTACTTTGGATATGCTTGTGTGTCTCCACATGATAGGGCATTCATTGTTCTTAGTCCTGATGGAGATGGATCTGTTAATGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTTAAGAAGTTCTTCTATGAagatatatga 1362 0.337 MVSIKSSYTVIPEEPTPQGRLWLTDKDQVATKHHTNTIYIYKPKQNQENVIETLKNSLSKILVYYYPIAGRLCYSKEGDGRLELNLNAKGVILLEAETTKTIHDYGDFAPSDSTKELVPIVNYNQPFQEMPLLLVQLTSFKNNQGFAIGVALSHSLTDGIGAGGFINSWAKIARGETLEPNDLPFLDRTIIKFSHTPSKVPRFEHIELKPLPLILGRKDTSEERKKKTVGTILKLSYDHVEKLKKKANEFLSMEKKEGSRPFSKFEAIGAHLWRCASKARGLEDNQESVVRFHADIRKRIIPPLPQNFFANALVLTATKGYIGEITSKPLGYVAQKIREGTEIVKDDFIKSQIDVIRSYKNMSDAMQLFLGDEYEKAPYFGNPNFQIASWTGIPFYETDFGWGKPIYFGYACVSPHDRAFIVLSPDGDGSVNVCLHFQIAHLELFKKFFYEDI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00483 453 Pfam Transferase family 1 451 - -
Tsu03g00483 453 Gene3D - 1 210 IPR023213 -
Tsu03g00483 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 453 - -
Tsu03g00483 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 453 - -
Tsu03g00483 453 Gene3D - 216 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00483 Tsu-Chr3 4108675 4110036 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00483 2 451 Monolignol Biosynthesis Gene Families AT5G48930 34.071 7.10e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00483 K13065 - gmx:100778626 545.428