Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00481 ATGGTTAGCATTAAAAGTTCTTACACTGTGATTCCAGAAGAACCAACACCACAAGGTCGTTTATGGCTCTCTGACAAAGACCAAGTAGCAACTCTACATCACACACCCACCATTTACatttacaaaccaaaacagaacCAAGAAAGTGTCATAGAAACACTAAAGAACTCTCTAAGCAAAATTCTAGTTCACTACTATCCTATGGCTGGTAGATTGTGTTACACATATGAAGATGGTGGTAGAAAAGAAGTGAATCTCAATGCCAAAGGagccattttgcttgaagctgAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGATTCAACCAAAGAGCTTGTTCCAAAAATCAATTACAATCAACCCTTTCAACAAATTCCACTTCTTCTTGTGCAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCAATTGGCGTTGCTATTTCACATTCTATAGCAGATGGCATTGGAGCTGTTCGATTCATCAACTCGTGGGCGAAAATAGCACGTGGCGAAACCCTGGAGCCTAATGAATTACCCTTTCTTGATAGAACACTAATCAAATTTTCACACAAACCATCGAAAGTACCATCTTTTGAGCACATTGAATTGAAGCCTCTTCCACTCATTCTAGGAAGAAAAGAtacaagtgaagaaagaaagaagaagacaaCAGCAACACTATTGAAACTCTCAATTGATCATGTTgagaagttgaagaaaaaagCCAATGAATTTTTATCAATGGAGAAAAAAGAAGGGTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATCTATGGAGATGTGCATCTAAGGCACGTGATCTTGAACATAATCAAGAAAGTGTTGTTAGATTTCATGCTGATATTAGAAAAAGAATTATTCCACCACTTCCTCAAAACTTTTTTGCCAATGCTTTGGCACTAACTGCAGCAAAAGTATATATTGGAGAAATCATATCAAAGCCTTTAGGCTTtactgcagaaaagataagggaaGCAACTGAGCTTGTTAAAGATGATTTTATAAAGTCACAAATTGATGTTATCAGaagttttaaaaatatggaTGATgcaacaaaattgtttcttggTGATGAAACTGAAAATGCACCATATTTTGGGAATCCAAATTTTCAATTAGCTTGTTGGATGGGAATCCCATTTTATGAAGCTGATTTTGGATGGGGGAAGCCTATTTACTTTGGATATGCTGGTGTGTCTCCACATGATAGGGCATACATTCTGCTTAGTCCTAATGGAGATGGATCTGTTATTGTGTCTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAAGAAGTTCTTCTATGAAGATATATGA 1362 0.3289 MVSIKSSYTVIPEEPTPQGRLWLSDKDQVATLHHTPTIYIYKPKQNQESVIETLKNSLSKILVHYYPMAGRLCYTYEDGGRKEVNLNAKGAILLEAETTKTIHDYGDFSPSDSTKELVPKINYNQPFQQIPLLLVQLTSFKNNQGFAIGVAISHSIADGIGAVRFINSWAKIARGETLEPNELPFLDRTLIKFSHKPSKVPSFEHIELKPLPLILGRKDTSEERKKKTTATLLKLSIDHVEKLKKKANEFLSMEKKEGSRPFSKFEAIGAHLWRCASKARDLEHNQESVVRFHADIRKRIIPPLPQNFFANALALTAAKVYIGEIISKPLGFTAEKIREATELVKDDFIKSQIDVIRSFKNMDDATKLFLGDETENAPYFGNPNFQLACWMGIPFYEADFGWGKPIYFGYAGVSPHDRAYILLSPNGDGSVIVSLHFQIAHLELFKKFFYEDI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00481 453 Pfam Transferase family 1 451 - -
Tsu03g00481 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 453 - -
Tsu03g00481 453 Gene3D - 1 210 IPR023213 -
Tsu03g00481 453 Gene3D - 216 452 IPR023213 -
Tsu03g00481 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00481 Tsu-Chr3 4081088 4083119 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00481 2 451 Monolignol Biosynthesis Gene Families AT5G48930 33.925 2.00e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00481 K13065 - gmx:100778626 548.895