Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00453 ATGGTGAAACTTCGCTTGCCAAAGTCAGCCTTATTTTGTGGTGACAAGTTGGGTAATCTCATTTGGGGAGTAGCACAAaactttttcctatttattGCTATGGTGATTATGACCAATGGCTTACATTTTTTTCTAAAGCCTTATTCGCAACCTCGAATCATTTCCGACATATTTGTAGGACTAATTTTTGGAAACATAGGTTATGCACGTCATCTATTTACAGAATTCAACAGGACATTTGgatttataattgattttggtaTGATGGGTTATATGTTTGCATTAGGAGTAGAAATGGACCCATATGTACTATTACAGAAACCACCAAGACATGTTAGAGTTGCTTATTCAGGAGTTGGTATAACCTTCATGCTAGCAATCATTGTATCCCCTTTTCTAAGGTACTTCCCACACATACAAAAACTATTAGAATACAGCATAGCTCTTTCCATCCTTACAGCTAGCACGGATTCGTCTGCATTGACGCGTTTATTAACACAACTCAAAATCGGAAAGTCAGATATCGGGAAGCTTGTAATCGCATCCGCAATGCACTCAGATTTTGTGTGCTATTGTATGCTTTCCGTTTGTTACATACTTGCTCCACTCCCCGAAATTTGCGATGATTTGAACAAAcattatatttcaaaaacatCCAAGATGGGTATGGCAGTTTTGGGAGAAGTTTTATTCACACTATTGGTTTCGCCCTTTTTTATGAGTTGGGTTGATGAAGAAAATCCAGATGGTAGACCTATGAAAGGTCCACATTTGATACTTTCAATTGCATTTGTGGTGTTAATGTGTGCCTCTTCTGTTTTAGTTGGTTTTACTCCAATTTTAAGTGCATTTCTGGTAGGTGTTTGTTTTCCTAGAGAAAGTAGGGTTTCAAGATGGGTTATCACAAAAATCAACTATTTGttgaatacaattttttttccaatttttttcttgtgGGTTGGGTTTGAAGCTGATTTTAGGCATTTTGAAGTTAAAAGGTATAGTACATGGGCAAATATAGTGTGGCTTATGGTTGTGTCAATAGCTGGAAAAATTTCCGGAGCACTTGTGTCTGGCGCAGTACAAGGATTTCGTTGGCCTGAAGCAACTGCAATAGGATTGCTTCTTACCACAAAGGGACATTTGCATATCTACTTGGTTGTCAAAGTGATGAATTGTGTGGCAACAAATAAGTCCAATGGCATTGGGATGAtaattgcaatattttttaCAGTTATGTACACACCATCAGTTGTAGCACAAATCATAAGACGTGCAAAGAAATGGGTACCTACTCGTCACTTAGTGATTCAATTGCTCGACCCATCAAGCGAACTAAGGATCCTCTTATGTGTTCATGGACCTCACAATGTTCCTGCTTCCATAAACTTTGTAGAGATTTCAAAAGGAGCAGCTGATCCTGGTATTCTAGTATATGTCACTGACTTGATTGAACAAACCAACGAAATATCGGCAACTTTAGAGACGGACGAAGGAATGCACACAGAAACTGTGAAAGACAGGGAAATAATggaaatgagagaaaatatgACAAACTCATTCCAGGCACATGTTTTAGATAGCGGTGAAGGTATTACATTGAAAAGAAGCCTGGCACTGTCAACAATTAATAACATGCCACGAGACATTTGTGTTTTAGCAGAGGACATGATGGTTGCCCTTATCGTATTACCATTCCATAGGGTTCAGCGTCAGGACGGAAACTTGGATGGTGGTAATCAAGGGTTCAGATATGTCAACAGAAAGGTCCTGAGAAGTGCCCCTTGTTCTGTTGGAATTCTAGTAGATAGAGGCCTTGGATCATTTGAAGGTTTATCAAGatctcaaacaaaaataaatgtggCCGTCATATTCATTGGTGGGAAAGATGATAGAGAAGCACTTGCCTATGCTAGCCGTGTCTCGCGACATCCAGGAGTAAAGCTCACTGTAATAAGATTCCTAGTAGATACAAGTGCAGAAGCCTCTAGATTAGCTGGATACAGAATCATCCTACCagatcaagaaaaagaaatgcagTTAGATGATGAATGTTTTGCAGAGTTCTATGAGAAGCATGTGATTGGGGGAAAAATTGCATACATGGAGAAGCATCTTGCAAATGCTGCCGAGACATTTTCGATTCTCAAATCATTTGAAGGGCAATATACATTGGTTATTTTAGGTAGAGAAGGAGGGATAAACTCTATTTTGACAAGGGGGATGAATGATTGGCAACAGTGTCCTGAACTAGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAGGACTGTCTCAGTTTTGATCATACAACAACACAAAATTAAAGGACAAATAGATGGATTAGATGAAGACTTTTCTATCTTGTCATATAATAAGTATGGTTAG 2394 0.3693 MVKLRLPKSALFCGDKLGNLIWGVAQNFFLFIAMVIMTNGLHFFLKPYSQPRIISDIFVGLIFGNIGYARHLFTEFNRTFGFIIDFGMMGYMFALGVEMDPYVLLQKPPRHVRVAYSGVGITFMLAIIVSPFLRYFPHIQKLLEYSIALSILTASTDSSALTRLLTQLKIGKSDIGKLVIASAMHSDFVCYCMLSVCYILAPLPEICDDLNKHYISKTSKMGMAVLGEVLFTLLVSPFFMSWVDEENPDGRPMKGPHLILSIAFVVLMCASSVLVGFTPILSAFLVGVCFPRESRVSRWVITKINYLLNTIFFPIFFLWVGFEADFRHFEVKRYSTWANIVWLMVVSIAGKISGALVSGAVQGFRWPEATAIGLLLTTKGHLHIYLVVKVMNCVATNKSNGIGMIIAIFFTVMYTPSVVAQIIRRAKKWVPTRHLVIQLLDPSSELRILLCVHGPHNVPASINFVEISKGAADPGILVYVTDLIEQTNEISATLETDEGMHTETVKDREIMEMRENMTNSFQAHVLDSGEGITLKRSLALSTINNMPRDICVLAEDMMVALIVLPFHRVQRQDGNLDGGNQGFRYVNRKVLRSAPCSVGILVDRGLGSFEGLSRSQTKINVAVIFIGGKDDREALAYASRVSRHPGVKLTVIRFLVDTSAEASRLAGYRIILPDQEKEMQLDDECFAEFYEKHVIGGKIAYMEKHLANAAETFSILKSFEGQYTLVILGREGGINSILTRGMNDWQQCPELGPIGDVLSGPDFSRTVSVLIIQQHKIKGQIDGLDEDFSILSYNKYG 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00453 797 PANTHER CATION/H + ANTIPORTER 12 788 - -
Tsu03g00453 797 Pfam Sodium/hydrogen exchanger family 31 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu03g00453 797 PANTHER CATION/H+ EXCHANGER 3 12 788 - -
Tsu03g00453 797 Gene3D - 447 744 - -
Tsu03g00453 797 Gene3D - 25 430 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00453 Tsu-Chr3 3889771 3892861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00453 13 791 Antiporter Super Family AT3G52080 45.771 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00453 - - cam:101501359 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00453 03 3889771 3892861 Tsu03g00453 03 3889771 3892861 ECH