Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00443 ATGGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTGTTCAGACTTTAGTTGAGAAACTTACTTCAACAGAGTTTCTTGATTACATCACAAACACCAAGCTCGATGTCTCACTCTTGAGGGAGTTAAAAACAACACTGCTCACTCTTCAGCCTGTAATGGATGATGCAGAGGAGAAGCAGATCAACAATCCTATTGTCAAACAATGGCTTGATGACTTGAAAGATGCTGTCTTTGATGCTGAGGATTTGCTCAATCAAATCAGCTACGATTCTATGCGATGCAAGGTGGAAAATGCACAAGTTGGCAACAAAACTAATCAGAGGTGGAACTTCCTTTCATCTCCTTTAAAAAACTTCTATCGAGATAGGCAGTCAAACAATGGCTTGATCAATTCTCAGATGAAGACCATGTGTGAAACTCTACAGCGTTTTGCACTAGATAAAGTTACCCTTGGTCTGCAAACTAAAAGTGCTAGAGTTTCTAGTAGAACACCTTCAAGTTCAGTGGTAAATGAATCTGTCATGGATTATCCACTTGATCGGAAGAAATTGGTTTTGTTATGGATGGCAGAAGGCTTCCTTGATTGTTATCAAGGGGGAAAAGAGGCGGAGGAATTAGGTGATGATTGCTTTGTTGAATTGTTATCCAGATCCTTAATTCAACAATCAAATGATGATGTTCGTGGAAAAATCTTTAACATGCATGACCTTGTCAACGATTTAGCTACAGTCGTATCTGGAAAAAGTTGTCGTAGGTTTGAATGTGGTGACATCTCTGAAAATGTTCGGCATATCTCGTATAACCAAGAACTCTATGACATTTTCAAAAAGTTTGAGAATATATACAATTTCAAATTGTTGCGAAGCTTCCTGTCTATTACCTCCAGGTATCCTCACAATAGCATATCCATCAAGGTGGTTAACGATCTCCTACCAACATTGAAAAGGTTGCGTGTGTTATCACTGTCGGGGTATAGAAACATCACAGAGCTTTCGGATACAATTGGCAATTTGCTGCAATTGCGGTATCTAGATCTCTCCCACACTGAAATCAAAAGTTTGCCTTATACAATATGTAACCTTTACAATTTGCAGACATTGATTTTATCAAGTTGTCGGGGTCTAACTGAATTGCCAAAACACATGggaaatttaataaatttacgTCACCTTGATATAACAGATACAAACATAAAGGAGATGCCTGTGGAAATTGCAAGACTAGAAAACCTCCAAACTTTGACAGTTTTTGTAGTGGGTATGCGACATGTAGGGTTAAGCATCAAAGAGCTAAGAAAATTCACAAACCTACAGGGAAAACTTACCATCAAGGACTTGCATAATATCATTGATGTCAGGGAAGCAGAAGATGCCAACTTGAAAAGTAAAGAGAAAATTGAGAAGTTAGAGTTGTTATGGGGCAAACAAAGTGAAGACTCGCAAAAAGTGAAAGCTGTGTTTGCTATGTTGCAACCATCAATAAACCTGAAGAGCCTGAACATCGGCTTGTATGGCGGGACAAGTTTTCCGAGTTGGGTGGGAAATTCGTCGTTTTCTAATTTGGTGTCCCTTTGCATCAATAATTGTGAATATTGCATGACACTTCCACCGCTAGGGCAGCTACCTTCTCTCAAAGACCTAGAAATACATGGTATGAAGACATTGGAGACAATTGGCCCAGAGTTTTATTGTGCACAGGGAGGAGAATGTTCCAATACTTCCTTCCAACCATTTCTATCCCTTGAGCGTATAAAATTTGACAGCATGCCAAGTTGGAAGGAATGGCTTCCGTTTGAAGGCATAAACTTTGCTTTTCCTCAACTTAGAACTATGGAGTTTCTTAATTGTCCAGAACTAAGAGGACATTTGCCTAGCCACCTTCCTTGTATAGAAGAAATTGTAATAGATGGTTGTGCTCATCTATTGGAAACACCTTCCACTTTGCATTGGTTGTCgtcaataaagaaaattaatatcaatGGACTTGCTGGAATGACCCAATTGTCATTGCTTGAGAGTGATTCCCCATGTACGATGCAAGATGTAGTGATTGAAAATTGTGCTACGCTATTATCTGTGCCAAAGTTGATTCTAAGAAGCACTTGTCTTCAATTCTTGAATCTCGATTCTCTTTCTTCTCTCACTTCATTTCCCTCAAGTGGTCTACCCACTTCATTGCAATCACTTCGAATTGAAAATTGTAAGAATTTATCCTTCCTTCCTCCTGAAACGTGGAGCAATTACACATCACTTGTGACTCTTGAGTTATGGTGTAGCTGTGATGCACTTACATCCTTTCCACTTGATGGTTTCCCTGCACTCCAAGAACTTTACATATATGAATGTAAGAGTCTGGATTCCATTTATATTATAGAAAGTCCTTCACGTCAGCCGTCAAACCTCCAAACACTTGACATCACATGCCTTTGTTCATTTAAAGTCAAGCTTAAGATGGACACACTCACTGCTCTTAAAGATTTGTTGCTGGTTTGTAAAGGAGAGTTGTCATTTAGTGAAGGTGTTTGTCTACCTCCAAAATTACAATCAATCATTCTGTGTTTGTGGGGAAGAACAATGCCGCCTGTAACAGAATGGGGCCTTCAAGGCCTAACCGCTCTTTCAAGATTAAATATTCGAGGTTGTGATGATATAGTTAACACCTTGATGAAGGAGTCGTTGCTACCCATCTCCCTTGTGTCTCTGGATATCCGATATTATAAAATGAAGGCCTTAGATGTAAGTGGGCTTCGACACCTCTCCTCTCTTGAACGTCTTGTCTTTGTGAATTGTGAAGAGCTTGAGTCATTGCCAGAAAACTGCCTCCTCCCTTCCTCGCTGAAATCACTTTATTTTGTGGATTGTAAAAAGCTAGAGTCAATACCAGAAGACAACCTCCCTGACTCTCTTGAGTTACTGTGGATTTATAAATGCCCATTGTTAGAAGAAAGGTTTCAAGCTTTTCCTTTTCTTGGTATATCTATTATTTTGTCGGATGTAGTTCCATTAACCATTATTGGTGATCTTTGCTTTCCAGCTTTCAAAGTGACTCACCGATATCAATTCAAGATGGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTGTTCAGACTTTAGTTGAGAAACTTGCTTCAACAGAGTTTCTTGATTACATCACAAACAAAAAGCTGAATGAATCACTCTTGAGGCAGCTAAAAACAACACTGCTCACTCTTCAGGCTGTTCTGGATGATGCAGAGGAGAAGCAGATCAACAGTCCTGCTGTCAAACAATGGCTTGATGACTTGAAAGATGCTGTCTTTGATGCTGAGGATTTGCTCAACCAAATCAGCTATGATTCTCTGCGATGCAAGGTGGAAAATGAACAAGCTGGCAACAAAACTAATCAGGTGTGGAAATTCTTGTCATCTCCTTTTAAAAACTTCTATGCAGAGATCAATTCTCAGATGAAGATCATGTGTGAAACCCTACAGCTTTTTGCACAAAATAAAGATATACTTGGTCTGCAAACTAAAAGTACTAGAGTTTCTAGTAGAACACCTTCAAGTTCAGTGGTAAATGAATCTGTCATGGTGGGTAGGAAGGATGAAAAAGAGACAATAATGAACATATCCTTAATTCAACAATCAAATGATGATGTTCGTGGAAAAATCTTTAACATGCATGACCTTGTCAACGATTTAGCTACAGTCGTATCTGGAAAAAGTTGCCGTAGGTTTGAATGTGGTGACATCTCTGAAAATGTTCGGCATATCTCATATAACCAAACAAGGTATGACACTTTCAAAAAGTTTGAGAATGTCTATAATTTCAAATGCTTGCGAAGCTTCCTATCTATTACCAACAGATATCCTGACAATTGCATATCCATCAAGGTGGTTAACAATCTCCTACCAACATTGAAAAGGTTGCGTGTGTTATCGCTGTCAAAGTATAAAAACATCACAGAGCTTTCGCATACAATTGGCAATTTACTGCAATTGCGGTATCTAGATCTCTCCTGCACTGAAATCAAAAGCTTGCCTGATACAATATGTAACCTTTACAATTTGCAGACATTGATTTTATCAAGTTGTAAGGATCTTGTTGAATTGCCAAAACATATGggaaatttaataaatttacgTCACCTGGATATAACAGATACGAACATAAAGGAGTTGCCTGTGGAAATTACAAGACTAGAAAACCTCCAAACTTTGACAGTTTTTGTAGTGGGTAAGCGACATGTAGGGTTAAGCATCAAAGAGCTAAGGAAATTCACAAACCTACAGGGAAAACTTACCATCAAGGACTTGCATAATGTCATTGATGCCAGGGAAGCAGAAGATGCCAACTTGAAAAGCAAAGAGAAAATTGAGAAGTTAGAGTTGTTATGGGGCAAACAAAGTGAAGACTCACAAAAAGTGAAAGATGTGCTTGCTATGTTGCAACCACCAAAAAACCTGAAGAGCCTGAACATTGACTTGTATGGCGGGACAAGTTTTCCGAGTTGGTTGGGAAATTCGTCGTTTTCTAATTTGGTGTCCCTTCGCATCAATAATTGTGAACATTGCATGACACTTCCACCGCTAGGGCAGCTACCTTCTCTCAAAGACCTAGAAATACATGGTATGAAGATATTGGAGACAATTGGCCCAGAGTTCTATTGTGCAAAGGGAGGAGAATGTTCCAATTCTTCCTTCCAACCATTTCTATCTCTTGAGCGGATAAAATTTGACAGCATGACAAGTTGGAAGGAATGGCTTCAATTTGAAGGCATAAACTTTGCTTTTCCTCAACTTAGAACTATGGAGTTACTTAACTGTCCAGAACTAAGAGGACATTTGCCAAGCCACCTTCCTTGCATAGAAGAAATTGTAATAAAAGATTGTGCTCATCTATTGGAAACACCTTCCACTTTGCATTGGCTGTTGTCAATAAACAAAGTTTATATCAATGGGCTTGCTGAAAGGGCCCAATTGTCATTGCATGATAGTGATTCACCATGTACGATGCAGAAAGTTGTGATTGAAAAGTGTGTTTCACTATTATCTGtgccaaaattgattttgagaagCACTTGTCTTCAACACTTGAAACTCCATTCCCTTTCTTCTCTCACTGCATTTCCCTCAAGTGGTCTACCCACTTCATTGCAATCACTTGAAATTGACTATTGTGAGAATTTATCCTTCCTTCCTCCTGAAACGTGGAGCAATTACACATCACTTGTGCGTCTTGAGTTACGAAGTAGCTGTGATGCACTTACATCCTTTCCACTTGATGGTTTTCCTGCCCTCCAAATACTTGACATAGATAAATGTAAGAGTTTGGATTCCatttatattttagaaagtCCTTCACGTCTCGAATTCCTTTGTATCTCATGCCTTGGTTCGTTTAAAGTCAAGCTTAAGATGGACACGCTCACTTCTTTGGAACATTTGCGGCTGGATTGTGAAGGAGAGTTGTCATTTAGTGAAGGTGTTTGTCTACCTCCCAAATTACAATCAATGTATCTGCATTCGAGGGTAAAAACAATGCCTCCTGTAACGGAATGGGGTCTTCAAAGCCTAACAGCTCTTTCAAGTTTGAATATTAGAAGGAGTGATGATATAGTTAACACCATGATGAAGGAGTCGTTGCTACCCATCTCCCTTGTGTATTTGACTATTACTCATCTCTATAAAATGAAGGGCTTTGATGTAAGAAGTGGGCTTCAACACCTCTCCTCTCTCGAACATCTTATCTTTCATGATTGTGAACAACTTGAGTCATTACCAGAAAACTGCCTCCCTTCCTCGCTGAAATCACTTGCATTTTGGAAATGTGAAAAGCTAGAGTCAATACCAGAAGACAACCTCCCTGACTCTCTTGAGATACTGCACATTTATGAATGCCCATTGTTAGAAGAAAGGTATAAAAGGAAGGAACATTGGTCCAAAATTGCACACATACCTGCCATTGACATAAATCGCCAAGTCACAATGTGA 5985 0.3881 MAATMIGGAFLSATVQTLVEKLTSTEFLDYITNTKLDVSLLRELKTTLLTLQPVMDDAEEKQINNPIVKQWLDDLKDAVFDAEDLLNQISYDSMRCKVENAQVGNKTNQRWNFLSSPLKNFYRDRQSNNGLINSQMKTMCETLQRFALDKVTLGLQTKSARVSSRTPSSSVVNESVMDYPLDRKKLVLLWMAEGFLDCYQGGKEAEELGDDCFVELLSRSLIQQSNDDVRGKIFNMHDLVNDLATVVSGKSCRRFECGDISENVRHISYNQELYDIFKKFENIYNFKLLRSFLSITSRYPHNSISIKVVNDLLPTLKRLRVLSLSGYRNITELSDTIGNLLQLRYLDLSHTEIKSLPYTICNLYNLQTLILSSCRGLTELPKHMGNLINLRHLDITDTNIKEMPVEIARLENLQTLTVFVVGMRHVGLSIKELRKFTNLQGKLTIKDLHNIIDVREAEDANLKSKEKIEKLELLWGKQSEDSQKVKAVFAMLQPSINLKSLNIGLYGGTSFPSWVGNSSFSNLVSLCINNCEYCMTLPPLGQLPSLKDLEIHGMKTLETIGPEFYCAQGGECSNTSFQPFLSLERIKFDSMPSWKEWLPFEGINFAFPQLRTMEFLNCPELRGHLPSHLPCIEEIVIDGCAHLLETPSTLHWLSSIKKININGLAGMTQLSLLESDSPCTMQDVVIENCATLLSVPKLILRSTCLQFLNLDSLSSLTSFPSSGLPTSLQSLRIENCKNLSFLPPETWSNYTSLVTLELWCSCDALTSFPLDGFPALQELYIYECKSLDSIYIIESPSRQPSNLQTLDITCLCSFKVKLKMDTLTALKDLLLVCKGELSFSEGVCLPPKLQSIILCLWGRTMPPVTEWGLQGLTALSRLNIRGCDDIVNTLMKESLLPISLVSLDIRYYKMKALDVSGLRHLSSLERLVFVNCEELESLPENCLLPSSLKSLYFVDCKKLESIPEDNLPDSLELLWIYKCPLLEERFQAFPFLGISIILSDVVPLTIIGDLCFPAFKVTHRYQFKMAATMIGGAFLSATVQTLVEKLASTEFLDYITNKKLNESLLRQLKTTLLTLQAVLDDAEEKQINSPAVKQWLDDLKDAVFDAEDLLNQISYDSLRCKVENEQAGNKTNQVWKFLSSPFKNFYAEINSQMKIMCETLQLFAQNKDILGLQTKSTRVSSRTPSSSVVNESVMVGRKDEKETIMNISLIQQSNDDVRGKIFNMHDLVNDLATVVSGKSCRRFECGDISENVRHISYNQTRYDTFKKFENVYNFKCLRSFLSITNRYPDNCISIKVVNNLLPTLKRLRVLSLSKYKNITELSHTIGNLLQLRYLDLSCTEIKSLPDTICNLYNLQTLILSSCKDLVELPKHMGNLINLRHLDITDTNIKELPVEITRLENLQTLTVFVVGKRHVGLSIKELRKFTNLQGKLTIKDLHNVIDAREAEDANLKSKEKIEKLELLWGKQSEDSQKVKDVLAMLQPPKNLKSLNIDLYGGTSFPSWLGNSSFSNLVSLRINNCEHCMTLPPLGQLPSLKDLEIHGMKILETIGPEFYCAKGGECSNSSFQPFLSLERIKFDSMTSWKEWLQFEGINFAFPQLRTMELLNCPELRGHLPSHLPCIEEIVIKDCAHLLETPSTLHWLLSINKVYINGLAERAQLSLHDSDSPCTMQKVVIEKCVSLLSVPKLILRSTCLQHLKLHSLSSLTAFPSSGLPTSLQSLEIDYCENLSFLPPETWSNYTSLVRLELRSSCDALTSFPLDGFPALQILDIDKCKSLDSIYILESPSRLEFLCISCLGSFKVKLKMDTLTSLEHLRLDCEGELSFSEGVCLPPKLQSMYLHSRVKTMPPVTEWGLQSLTALSSLNIRRSDDIVNTMMKESLLPISLVYLTITHLYKMKGFDVRSGLQHLSSLEHLIFHDCEQLESLPENCLPSSLKSLAFWKCEKLESIPEDNLPDSLEILHIYECPLLEERYKRKEHWSKIAHIPAIDINRQVTM 1994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00443 1994 Gene3D Ribonuclease Inhibitor 824 995 IPR032675 -
Tsu03g00443 1994 PANTHER OS05G0414200 PROTEIN 1208 1680 - -
Tsu03g00443 1994 Gene3D Ribonuclease Inhibitor 1671 1803 IPR032675 -
Tsu03g00443 1994 SMART LRR_typ_2 387 410 IPR003591 -
Tsu03g00443 1994 SMART LRR_typ_2 1375 1398 IPR003591 -
Tsu03g00443 1994 SMART LRR_typ_2 1328 1351 IPR003591 -
Tsu03g00443 1994 SMART LRR_typ_2 1907 1931 IPR003591 -
Tsu03g00443 1994 SMART LRR_typ_2 340 363 IPR003591 -
Tsu03g00443 1994 PANTHER DISEASE RESISTANCE PROTEIN RP 178 632 IPR044974 GO:0006952
Tsu03g00443 1994 Coils Coil 454 474 - -
Tsu03g00443 1994 SUPERFAMILY L domain-like 1224 1649 - -
Tsu03g00443 1994 Gene3D - 1038 1155 - -
Tsu03g00443 1994 Gene3D - 14 126 - -
Tsu03g00443 1994 Pfam Rx N-terminal domain 1034 1126 IPR041118 -
Tsu03g00443 1994 Pfam Rx N-terminal domain 10 103 IPR041118 -
Tsu03g00443 1994 Gene3D Ribonuclease Inhibitor 681 823 IPR032675 -
Tsu03g00443 1994 Gene3D Ribonuclease Inhibitor 1805 1979 IPR032675 -
Tsu03g00443 1994 PANTHER DISEASE RESISTANCE PROTEIN RP 1208 1680 IPR044974 GO:0006952
Tsu03g00443 1994 SUPERFAMILY L domain-like 1679 1966 - -
Tsu03g00443 1994 Coils Coil 1065 1085 - -
Tsu03g00443 1994 SUPERFAMILY L domain-like 236 675 - -
Tsu03g00443 1994 Gene3D - 176 246 IPR036388 -
Tsu03g00443 1994 Gene3D Ribonuclease Inhibitor 1268 1670 IPR032675 -
Tsu03g00443 1994 Gene3D Ribonuclease Inhibitor 269 680 IPR032675 -
Tsu03g00443 1994 Coils Coil 1442 1462 - -
Tsu03g00443 1994 SUPERFAMILY L domain-like 686 989 - -
Tsu03g00443 1994 PANTHER OS05G0414200 PROTEIN 178 632 - -
Tsu03g00443 1994 PANTHER OS05G0414200 PROTEIN 1047 1205 - -
Tsu03g00443 1994 PANTHER DISEASE RESISTANCE PROTEIN RP 1047 1205 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00443 Tsu-Chr3 3782807 3793916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00443 311 425 WRKY Transcription Factor Family AT4G12020 36.207 1.31e-07 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00443 - - mtr:MTR_3g032370 1102.04