Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00419 ATGGTATGCATAAGAAAAGCCAACGTTAACGACCTACTCGCGATGCAAGCATGTAACCTCTTCTGTTTACCGGAGAATTACCAGATGAAGTATTATCTTTATCATATCCTCTCTTGGCCGCAACTTCTTTACGTCGCCGAAGATTACAATGGTCGTATCGTCGGTTACGTTCTCGCTAAGATGGAAGAGGAAACCAATGAGTGTCATGGTCATATTACTTCTCTTGCTGTTCTTCGTACTCATAGGAAACTTGGTATTGCTACTAAGCTTATGACTGCAGCACAGAATGCTATGGAACAGGTGTTTGGTGCCGAGTACGTGTCGCTGCACGTCAGGAAGAGCAACCGTGCAGCTTTTAATTTGTACACAGAGACCTTGGGGTACAAGATTCATGATGTGGAGGCCAAGTATTATGCTGATGGGGAGGATGCTTACGACATGAGGAAGCAACTCAAGGGGAAACAGTTGCATCCGCCGCagcatcaccaccaccaccatcaccatGGTGGTGGCTGTTGTTCTGGGGAGACCAAGGGGAATGCAAAAGCCACCTGA 555 0.445 MVCIRKANVNDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETNECHGHITSLAVLRTHRKLGIATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQLHPPQHHHHHHHHGGGCCSGETKGNAKAT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00419 184 CDD NAT_SF 43 110 - -
Tsu03g00419 184 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016407
Tsu03g00419 184 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016407
Tsu03g00419 184 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 179 IPR045047 GO:0004596|GO:0006474|GO:0031415
Tsu03g00419 184 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Tsu03g00419 184 PANTHER ACYL-COA N-ACYLTRANSFERASE-RELATED 1 179 - -
Tsu03g00419 184 MobiDBLite consensus disorder prediction 152 184 - -
Tsu03g00419 184 MobiDBLite consensus disorder prediction 154 169 - -
Tsu03g00419 184 Gene3D - 2 175 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu03g00419 Acetyltransf_1 1.5e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00419 K20791 - gmx:100810038 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00419 03 3540218 3545118 Tsu03g00419 03 3540218 3545118 ECH