Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00410 ATGGCAGAAGGCTTCCTTGAACATTCTCAAGACGAAAAAGAGGCAGAGGAAGTAGGGGATGACTATATTGTTGAGTTGTTATCCAGATCATTAATTCAACAATCAAATAATGATTTTGGAGGACAGAAGTTTGTCATGCACGACCTTGTCAATGATTTAGCTACAATTGTAGCTGGAAAAAGTTTTCATAGACTTGAATGTGGTGATTCTTACTTATCCAACAAGGCGGTCGATGATTTGCTACCCAAAATGAAAAGACTGCGCGTGCTATCACCATCAAATTATGTAAGCATCACTGAGCTACCAGATTCAGTTGGTAATTTGGTGCAACTACGGTATCTGGATCTCTCTAATACTAGAATCAAAAGTTTGCCAAATACAATATGTAACCTTCACAATTTGCAAACCTTGAATTTATCAGGCTGCAAGAATCTCACTAAGTTGCCCACATATGTCggaatattaattaatttacgtCACCTTGATATTACTGAGACTGACATAAAGGAGTTTCCAATGGAAATTGTTGAATTGAAAAACCTTCGAACTCTATCCTACTTTGTAGTGGAAAGGGGACAAGTTGGGTTAAGTATCGAAGAGCTTAGGAAATTCACACACCTACAGGGAGTACTTACCATTAAGAACCTGCATAATGTCATTGATGCCATGGAGGCATATGATGCTGACTTGAAAAACAAAGAACATGTTGAGGATTTAGTACTACAATGGGGTACACAAACGGAAGACTCACAAAGAGAAATGGCCGTGCTTGATGCATTGCGACCATCTATCAACCTAAAGGAATTGAGCATTGACTTATATGGTGGGACAAGCTTTCCGAGTTGGTTGGGagattcttctttttctaaCATGGTGTCCCTTTACTTAAAAAATTGTGAATATTGTATAACACTTCCACTGGGGCAACTACCTTCTCTAACGTGGCTACATATAGATGGTATGAAGATATTGGAGACAATTGGTCCAGAGTTCTATTATGACATATCAGGGGgagctttcaatttttcattccaaCCATTTCCATCCCTCGAGATGTTGGAATTTAGCAACATGTTAAATTGGAAGGAATGGCTTTCCTTTGAAGGTGATGAATTTACTTTTCCTCATCTTAAATGCTTGTGGATAGATAAATGTCCTAAATTGAAGGGACAATTGCCTAGCCATCTTTCTTCCATTGAAACAGTTTGTACAATAGAGAGTGATAGTCTCTTGACAACAATATCTACTCTGCAATGA 1257 0.3683 MAEGFLEHSQDEKEAEEVGDDYIVELLSRSLIQQSNNDFGGQKFVMHDLVNDLATIVAGKSFHRLECGDSYLSNKAVDDLLPKMKRLRVLSPSNYVSITELPDSVGNLVQLRYLDLSNTRIKSLPNTICNLHNLQTLNLSGCKNLTKLPTYVGILINLRHLDITETDIKEFPMEIVELKNLRTLSYFVVERGQVGLSIEELRKFTHLQGVLTIKNLHNVIDAMEAYDADLKNKEHVEDLVLQWGTQTEDSQREMAVLDALRPSINLKELSIDLYGGTSFPSWLGDSSFSNMVSLYLKNCEYCITLPLGQLPSLTWLHIDGMKILETIGPEFYYDISGGAFNFSFQPFPSLEMLEFSNMLNWKEWLSFEGDEFTFPHLKCLWIDKCPKLKGQLPSHLSSIETVCTIESDSLLTTISTLQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00410 418 Pfam Leucine Rich repeats (2 copies) 110 149 IPR025875 -
Tsu03g00410 418 Gene3D Ribonuclease Inhibitor 54 417 IPR032675 -
Tsu03g00410 418 PANTHER DISEASE RESISTANCE PROTEIN RP 1 395 IPR044974 GO:0006952
Tsu03g00410 418 ProSiteProfiles Leucine-rich repeat profile. 110 131 IPR001611 GO:0005515
Tsu03g00410 418 SUPERFAMILY L domain-like 45 398 - -
Tsu03g00410 418 PANTHER OS05G0414200 PROTEIN 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00410 Tsu-Chr3 3487651 3489037 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00410 98 191 WRKY Transcription Factor Family AT4G12020 45.263 6.69e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00410 - - mtr:MTR_3g033080 514.227