Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00408 ATGCTACCAGACTCAATTGGCAATTTGGTACAATTGCGATATCTAGATCTCTCATGTACTGAAATCACAAGCTTGCCTAACACAATATGCAACCTCTACTATTTGCAAACCTTGAATTTATCCCAATGCTCAAATATCACTAAATTGCCAGAACATGTTGGAAAGTTAATTAATTTACGTTACCTTGACATCGAATTGACGAGCATAACAGAGATGCCAAAACAAATTGTTGAGCTAGAAAACCTTCAAAATTTAACTGTTTTTGTAGTAGGCAAGAAAGACATTGGTTTAAGTGTTAGAGAACTTGGAAGATTTCCTAACCTACGAGGAAAATTATTCATCAAGAACCTGCAAAATGTCACTGATGTTGTGGAGGTATATGATACCAACTTAAAGAACAAAGAACATATTGAGGAATTAATCCTACAATGGGGCACTGAAAGTGATGACTCACTTAAAGGGAAAGATGTCCTTGATATGTTACAACCATCAACAAACCTGAAGAAGTTGAGCATTGACATGTATGGTGGGACAAGTTTTCCTGGTTGGTTGGGAGATTCTTCATTTTCTAGCATGGTGTCCCTAGTCATCTTCCATCCATAG 603 0.3682 MLPDSIGNLVQLRYLDLSCTEITSLPNTICNLYYLQTLNLSQCSNITKLPEHVGKLINLRYLDIELTSITEMPKQIVELENLQNLTVFVVGKKDIGLSVRELGRFPNLRGKLFIKNLQNVTDVVEVYDTNLKNKEHIEELILQWGTESDDSLKGKDVLDMLQPSTNLKKLSIDMYGGTSFPGWLGDSSFSSMVSLVIFHP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00408 200 Gene3D Ribonuclease Inhibitor 1 199 IPR032675 -
Tsu03g00408 200 Pfam Leucine Rich Repeat 35 56 IPR001611 GO:0005515
Tsu03g00408 200 PANTHER DISEASE RESISTANCE PROTEIN RP 2 189 IPR044974 GO:0006952
Tsu03g00408 200 PANTHER OS07G0273700 PROTEIN 2 189 - -
Tsu03g00408 200 SUPERFAMILY L domain-like 2 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00408 Tsu-Chr3 3481853 3482455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00408 2 94 WRKY Transcription Factor Family AT4G12020 38.298 8.72e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00408 - - mtr:MTR_0002s0120 273.478