Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00403 atggaTGATGTAAGTTCTGAGATTTCTGATAAGCTTTCAGATAATGTTCTATTTTCAAATCCAGAATCATGTAGCAATTTTCAAGCTTCAACATCTTTGAACACAGTTACTGAATTATCTAAGAACACCACAAAAACATGCACTCACACTCACACTTGTAATCCACCTGGTCCTGATGATGCTATTCATACACACACATGTTTTCATACACATACTCGAGTTTTTGCATCGGAAGATGACACAAATTCAAGGCCAAAAAGGACTTCTGGAAATAGAGAAGCTGTTAAAAAGTATAGGGAGAAGAAAAAGGCACAAACAGCTTATTTAGAGGAAGAAGTTAAGAAGTTGAAACTGTTGAATCAACAACTATTGAGGAAATTACAAGGGCAAGCACTACTTGAAGCAGAATTGTTAAGGTTAAGGAAAGTTTTTGTACAACTTAAGGGAAAAATTGACAGTGAATTAGGTTATTTCCCTTTTCAAAAACAGTGTTTCCCTTCTAGTATTTACAAAGGAGATGCTAATTTGGTTtcaacttctcaaccagttgaTCTTGAGCTATGTAGCACTGAAACTTCAGATTGA 585 0.3333 MDDVSSEISDKLSDNVLFSNPESCSNFQASTSLNTVTELSKNTTKTCTHTHTCNPPGPDDAIHTHTCFHTHTRVFASEDDTNSRPKRTSGNREAVKKYREKKKAQTAYLEEEVKKLKLLNQQLLRKLQGQALLEAELLRLRKVFVQLKGKIDSELGYFPFQKQCFPSSIYKGDANLVSTSQPVDLELCSTETSD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00403 194 MobiDBLite consensus disorder prediction 78 99 - -
Tsu03g00403 194 SUPERFAMILY Leucine zipper domain 85 128 IPR046347 GO:0003700|GO:0006355
Tsu03g00403 194 Gene3D - 71 148 - -
Tsu03g00403 194 Coils Coil 106 126 - -
Tsu03g00403 194 PANTHER CCAAT/ENHANCER BINDING PROTEIN 13 165 - -
Tsu03g00403 194 CDD bZIP 91 113 - -
Tsu03g00403 194 PANTHER BASIC LEUCINE ZIPPER 23 13 165 - -
Tsu03g00403 194 SMART brlzneu 78 146 IPR004827 GO:0003700|GO:0006355
Tsu03g00403 194 Pfam Basic region leucine zipper 81 134 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00403 Tsu-Chr3 3453986 3454570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00403 43 180 bZIP Transcription Factor Family AT3G51960 55.172 3.87e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu03g00403 bZIP_2 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00403 K25785 - gmx:100527780 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00403 03 3453986 3454570 Tsu03g00403 03 3453986 3454570 ECH