Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00376 ATGGCAGCAAAGTTTGATGTTGGTGATGCATTTCTATCATCTGTGTTTCAAGAGATTTACGAGAGGTTGGGATCTTTCAGAAACTACTTCCAGAAAGAGGTGGTGAGAAAACTTGAAATCACACTGCTTTCTATCAATGAAGTGCTGGATGACGCAGAGACAAAGCAGTACAAAGACCCAAAAGTGAAGAATTGGGTTGATGATCTCCAACATGAGTTATACGAATTAGACCAACTATTGGATCTGATTTCTACTGACGCTCAACGAAAGGGAACAATACGACGCTTTGTTTCAGGTTTTATCAAACGAtctgaatataaaaaattgctACAGAGGCTAGAGTTTCTTGCAGAACAAAAGTATATGTTTGGACTTCAAGAAGCAATAACTCGTGATAATCATGTATGGGAGAATCTATCAACTACTACATCTTTGGTGGATGAATCTTCCATATATGGTAGAGAGCATGAGAAAGAgcaaataatcaattttttactATCAGACAGTGACGGTGAAAACCTATCCATAATCGGTATAGTGGGTCTGGGTGGGATGGGTAAGACAGCTCTTGCCCAGCTTGCTTACAATGACCACAGGATTGAAGAGCAATTCGAAATGAAAGCTTGGGTCTATGTTTCAgaatcttttgatattgttaagCTCACCCGATCAATTCTGGAGGCACTTGGTTCTTCAGAAGCAGATAGTGAAGACTTCGTAATACTCCAACGTCAATTGCAACAGAGGCTAATGGGCAAGAGATATTTGCTTGTTCTAGATGATGTTTGGCACAAAGATGGTGTTGGGGCTATCTTGGATCATTTACTACTTCCTTCTAGCCGTGGATCTTCTCAAGGTAAGGTCATCGTCACAACGCGGGATAAGGAAGTAGCAACCATCATGAAATACACGCGCCTACTTCATTTAAAGCAAttggaggagagtgattcttGGAGATTATTTGTGAATATTGCTTTTCAAGGCAGGAATGTCGTTGAATATCCAAATCTTGAATTGATTGGCAAGAAAATAGTAGAAAAGTGTGGCGGATTGCCTTTAGCTCTGAAATCAATGGGAAATATCTTGAGAAGAAAATTCAATGAACATGAATGGCTCAAGATATTGGAGACTGATGACAACAACATTAACTCCATACTGAGATTGAGTTACTTTAACTTCCCTTCCATTGTGAAGCGTTGTTTTGCTTATTGTTCTATATTTCCAAAGGGCTATGAGTTTGAGAAGGGTGAATTAATCAATCTTTGGATGGCACAAGGTTTGCTCAAGTGTCGCGTAAGAAACAAAAGCGAAGAAGAGTTAGGTAACGAATTCTTCGATCATCTAGTGTCAATATCGTTTTTCCGACAATCAGTAGTTATGCCATTTTGGACTGGTAAGTACTACTTCATCATGCACGATTTTGTCAATGATTTAGCAAAATCAGTGTCCGGAGAATCCTACCTACGAATAGAGGGTGATAACGTGCAAGATATCCCTGAAAGGACACGTCACATCTGGTGCTGCCTTGATTTGAAAGACGGTGATAGGAAACTAGAGCATATTCATAAAATTAAGGGACTACACAGTTTGATGGTAGAAGCACAGAGCTATGGTGACCAACGCTTTAAGATAAGCACTAATGTGCAGCGAAAATTGTTTTCAAGATTAAAATATTTGCGGATGTTGTCTTTTTCTAGTTGCAATCTCTTAGAGCTAGCTGATGAGATAAGAAGTTTAAAGCTTCTGCGCTATATAGACCTTTCTTACACTGAGATTGCAAGCTTACCTAATTCCATTTGTATGCTGTATAATTTGGAGACACTCCTATTGCAAGATTGTTTTAAACTGAATGAGCTCCCGTCAGATTTTTACAAACTCATCAATTTACGTTATCTTAATTTAGAAGGCACTCTTATAAAAAGTATGCCAACAAAGATAGGAAGGTTAAACAATCTTGAGGTGCTGACTGATTTTGTTGTGGGAGAGCAGCATGGATTTGAAATTAAGCAGTTAGGGAAACTGAACCAACTTCGAGGAAAACTTATAATTTCAGGGTTGGAAAATGTTATTGATCCTGCAGATGCGGTGGCAGCAAATTTGGCAGAGAAAGAACATTTAGAAGAATTGATTATGTCATACGATCAATGGAGAGACATTGATGAATCAGTAACTAATGCACATGTCCTTGTCTTGGAGGCTCTTCAGCCAAATAGAAACCTCATGAAGCTCACCATCAAAGACTACAGAGACAGTAGCTTTCCAAATTGGCTTGGGGATCCTCATTTACCCAATTTAGTATCTCTTGAATTGTTGGGATGTAAACTTAGTTCCCAGATGCCACCACTTGGGCAATTTCCCTCTCTCAGGAAGCTTTCCATTTCAAGCTGCGATGGAGTAGAGATCATTGGTAGAGAGTTTTACGGTTATAATCATTCATCAAATGTTCCATTtggatcccttaaaattttgcGATTTGAGCGCATGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTTCAAGAACTTTATATCAAACATTGTCCCAATTTGAAAAGTGCCCTGCCTCGACACCTTCCTTCTTTGCTGAAATTGGAGATTATTGATTGTCAAGAGTTGGAGGCTTCAATTCCCAAGGCTGATAAATATCATGCCTTTCTTGTTGAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATCTTGAATGGTCCTCTTTGGATTTCAATAGCTGCAATTCTCTTCGCACTCTAACTATAACTGGTTGGCACTCTTCTTCCTTGCCTTTTGCACTACACTTGTTCACCAATCTTAATTCTCTCGTGTTGTACGATAGTCCAAGCCTTGAATCGTTTTTCGGGAGGAAGTTGCCTTCCAACTTATCCAGCCTCAGAATAGAAAGATGCCCTAAATTGATGGCTTCGAGAGAGGAGTGGGGTTTGTCACTACTCAATTCTTTGAAATACTTCAGTGTTAGTGATGATTTTGTAATCTTAGAGTCCTTTTCGGAGGAGAGTCTGCTGCCATCAACCGTTAACTCTCTTGAGTTGATAAACTGTTCCAACCTAAGAATAATAAACTACAAGTGTCTTCTCCACCTCACTTCACTTGAATATCTATATATTGAAGACTGCCCATGTCTCGAGAGCTTGCCAGCGGAGGGTCTACCCAGCTCCCTTTCTACTTTGTCCATTCATGATTGTCCATTAATTAAGGAGCTGTACCAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCATATCCCTTCTGTGACGATTTCCTAA 3291 0.3865 MAAKFDVGDAFLSSVFQEIYERLGSFRNYFQKEVVRKLEITLLSINEVLDDAETKQYKDPKVKNWVDDLQHELYELDQLLDLISTDAQRKGTIRRFVSGFIKRSEYKKLLQRLEFLAEQKYMFGLQEAITRDNHVWENLSTTTSLVDESSIYGREHEKEQIINFLLSDSDGENLSIIGIVGLGGMGKTALAQLAYNDHRIEEQFEMKAWVYVSESFDIVKLTRSILEALGSSEADSEDFVILQRQLQQRLMGKRYLLVLDDVWHKDGVGAILDHLLLPSSRGSSQGKVIVTTRDKEVATIMKYTRLLHLKQLEESDSWRLFVNIAFQGRNVVEYPNLELIGKKIVEKCGGLPLALKSMGNILRRKFNEHEWLKILETDDNNINSILRLSYFNFPSIVKRCFAYCSIFPKGYEFEKGELINLWMAQGLLKCRVRNKSEEELGNEFFDHLVSISFFRQSVVMPFWTGKYYFIMHDFVNDLAKSVSGESYLRIEGDNVQDIPERTRHIWCCLDLKDGDRKLEHIHKIKGLHSLMVEAQSYGDQRFKISTNVQRKLFSRLKYLRMLSFSSCNLLELADEIRSLKLLRYIDLSYTEIASLPNSICMLYNLETLLLQDCFKLNELPSDFYKLINLRYLNLEGTLIKSMPTKIGRLNNLEVLTDFVVGEQHGFEIKQLGKLNQLRGKLIISGLENVIDPADAVAANLAEKEHLEELIMSYDQWRDIDESVTNAHVLVLEALQPNRNLMKLTIKDYRDSSFPNWLGDPHLPNLVSLELLGCKLSSQMPPLGQFPSLRKLSISSCDGVEIIGREFYGYNHSSNVPFGSLKILRFERMSEWKEWLCLEGFPLLQELYIKHCPNLKSALPRHLPSLLKLEIIDCQELEASIPKADKYHAFLVELEVEDFFGPNLEWSSLDFNSCNSLRTLTITGWHSSSLPFALHLFTNLNSLVLYDSPSLESFFGRKLPSNLSSLRIERCPKLMASREEWGLSLLNSLKYFSVSDDFVILESFSEESLLPSTVNSLELINCSNLRIINYKCLLHLTSLEYLYIEDCPCLESLPAEGLPSSLSTLSIHDCPLIKELYQKEGGERWHTISHIPSVTIS 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00376 1096 PANTHER DISEASE RESISTANCE PROTEIN RP 20 1052 IPR044974 GO:0006952
Tsu03g00376 1096 SUPERFAMILY L domain-like 471 877 - -
Tsu03g00376 1096 PRINTS Disease resistance protein signature 348 362 - -
Tsu03g00376 1096 PRINTS Disease resistance protein signature 860 876 - -
Tsu03g00376 1096 PRINTS Disease resistance protein signature 249 263 - -
Tsu03g00376 1096 PRINTS Disease resistance protein signature 176 191 - -
Tsu03g00376 1096 Gene3D - 390 482 IPR036388 -
Tsu03g00376 1096 Gene3D Ribonuclease Inhibitor 888 1093 IPR032675 -
Tsu03g00376 1096 SUPERFAMILY L domain-like 843 1076 - -
Tsu03g00376 1096 Pfam Rx N-terminal domain 13 91 IPR041118 -
Tsu03g00376 1096 Gene3D - 132 306 IPR027417 -
Tsu03g00376 1096 PANTHER OS05G0414200 PROTEIN 20 1052 - -
Tsu03g00376 1096 Gene3D - 12 115 - -
Tsu03g00376 1096 Coils Coil 35 55 - -
Tsu03g00376 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 404 IPR027417 -
Tsu03g00376 1096 Gene3D Ribonuclease Inhibitor 667 887 IPR032675 -
Tsu03g00376 1096 Gene3D Ribonuclease Inhibitor 504 660 IPR032675 -
Tsu03g00376 1096 Pfam NB-ARC domain 154 377 IPR002182 GO:0043531
Tsu03g00376 1096 Gene3D - 311 389 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00376 Tsu-Chr3 3180525 3183939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00376 151 643 WRKY Transcription Factor Family AT5G45050 21.676 1.74e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00376 - - mtr:MTR_3g021170 1421.37