Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00371 ATGTCAAGAGTGGTAGTAGCTATTGGAGAGTGGTTGAATTTTGAATGTAAGAAAGAAGAATGGTGGATGGGATTGATCCATGGAGGTGGGCAGTTGCAGGGTAAGAGTACCCTTGCATGGCTTGTTTACAGTGACCACAAGATGATGGAGCAAGTTGAACTTAAAGCTTGGGTACATGATTCGGAATCTTATGATCTTGTTCATCTTACTAAATCAATTCTCAGGTCATTTTGTTCTCCACCGAAAAGTAAAGACTTGGAAACACTCCAACGTCAATTGCAACGGTTGATAACAGGCAAGAAATATTTGCTTGTTCTTGACTGTGTTTGTAGCAGGGATGAAGAATTTTTGGAGAAGTTACTATTTCCTTTTAACCATGGGTCTTCTCAAGGTAAGATAATCGTGACTACACTTGACAAGGAAGTAGTATCAATCATGAGATCCACCCGGCTACTGGATTTAAAGGAATTGGAAGAGAGTGACTGTTGGAGTTTATTTGTGAGCCGTGCTTTTCATGACAGGATTACGGGTCAATATCCAAATCTTGAAATTATTGGCAAGAAAGTAGTAGACAAGTGTGGAGGTTCGCCTTTAACTATGACAGAAATGGGGAATCTCTTGCGTAGAAAATTCTCTAAATGTGAGTGGGTTAAGATAATGGAGACTGATTTGCGGAGTTTAACAGATGTTGGCTTTAACATGATCCCGATACTGAGAATGAGTTACCTTAATCTCTCTTCCAATCTGAAACATTGTTTTGCTTATTGTTCCATATTTCCCAAGGGCTATGAGTTTGAGAAAGGTGAACAAATCAAGCTTTGGATGGCAGAAGGTTTGTTGAAGTGTTGCGGAAGAGACAAAAGTGAAGAAGAGTTGGGTAATGAATTCTTCGATGATCTAGTGTCAATATCATTTTTCCAACGATCAGTAACTATGCCATCATGGGCTGGTAAGTACTACTTCATCATGCATGATCTTGTTAATGACTTGGCAAAATCAGTGTCAGGAGAATTCCGCTTAAGATTAGAGGGTGATAATATGCAAGATATCCCTAAAAGGACACGTCACATTTGGTGCTGTCTTGATTTGGAAGATGGTCATAGAAAACTAAATCAGATTCATAAAATTAAGGGACTACACAATCTGATGGAAGAAGCACATGGATATGGTGACCAGCGATTTAAGATAACCACCGATGTTCagcttaatttattttcaagaCTAAAATATTTGCGGATGTTATCTTTCAATGGTTGCAATCTCTCAGAGATAGCGGATGAGATAAGCAACTTAAAGCTTCTGCGTTATCTAGACCTTTCTTATACTGAGATTACAAGCTTAACAAATTCCATTTGTATGCTGTATAATTTGCATACCCTCTTATTAGAAGAATGTTTTAAATTGATTGAGCTCCCTTCAGATTTTTGCAAACTCGTTAATTTGCGTCATCTTAATCTGAAAGGCACGAATATTAAGAAGATGCCAACGAAGTTAAGAGTGTTAAACAATCTTGAGATGCTGACTAATTTTGTTGTGGGAGAGCAGTGTGGATTTGATATTAAGCAGTTGGCGGAACTCAATTATCTTCAAGGAAGGCTTCAAATTTCAGGGTTGAAAAATGTCATTGATCCAGCACATGCTGTGGCAGCAAACTTGAAAGATAAGAAACATTTAGAAGAATTAAGTATGTCATACGATGAATGGAGAGAAATGGATGGATCAGCATCTAAAGCACATGTCTATGTCTTGGAGGCTCTTCAACCAAATAGAAACCTCATGAGGCTAACCATCAAAGAATACAGAGGCAGTAGTTTTCCAAATTGGCTTGGGGATCGTCATTTACCCAATTTAGTATCGCTTGAATTGTTGGGATGCTGTGATGGAATAGAGACCATTGGTACAGAGTTTTACGGCTATAATTCATCAAATGTTCCATTTAAATCCGTTGAAACTTTGCGATTTGAGCACTTGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTTCAAGAGCTTTGTATAAAACATTGTCCAAAGTTGAAAAGTGACCTGCCTCAACACCTTCCTTCTCTGCAAAAATTGGAGATTATAGATTGCCAAGAGTTGGAGGCTTCAATTCCCAAGGCGGATAATATCAGTGAGCTAGAACTAAAAAGATGTGATGAAATTTTGATAAATGAATTGCCATCCAGGGTGAAAAAGGTCATCCTTTGTGGAACTCGGGTCATTCGTTCCTCGCTAGGGAAAATTCTATTTAACAGTGCCTTTCTTGAAGAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATCTAGAATGGCCATCTTTGGATTTTCTTAGTTGTAATTCACTTCGAACTCTAACTATAACAGGTTGGCACTCTCCGTCCTTGCCTTTTGCACTACACATGTTGCCCAATCTTAATTCTCTTGCGTTGTACGATAGTCCGTGGCTGGAATCATTTTTCGGGAGGCAGTTGCCATCCAACCTATGCAGCCTCCGAATAGAAAGATGTGCTAGACTGATGACTTCGAGAGAAGAGCGGGTTGAAAACAAGCTCAGAGAGCCTGCCAGATTTAATATTATGGTAGAGGCTGTTGGTGAGGCATTTCTATCGTCTGTGTTTCAAGTGATTCGCGAGAGGTTGGCTTCAAGAGATTTCAGAGACTACTTCCATGAAAGGGTGGGGAAAAAACTTGAGATCATATTGGATTCTATCAATCAAGTACTGGATGATGCAGAGACAAAGCAGTACCAAATGCAAAACGTGAAGAAATGGCTGGATGATCTCAAATATGAGGCGTACGAAGTAGAGCAGCTATTGGATGCGATTGCTATTGACGCACAACAAAAGGGCAAGATACTACGCTTTTTTTCAGTGGATGAATCTGACATCTATGGTAGAGAGAATGAAAAAGAGGAAATAATCGAATTTTTACTTGCAGATAATGGCAGTGACAACCAGGTACCCATAATCAGCTTAGTGGGTCTGATGGGGATGGGTAAGACAACCCTTGCCCAGCTTGTTTACAATGACCACAGGATAAAGAAGCAATTTGACCATATAGCTTGGGTCCATGTTTCAGAATCTTTTGATCTTATTCGTCTCACTCGATCAATTCTCGACACATTTCTTTCTTCAGTAGcagattttactttttttggtaaaaaattttCAATAGCAGATAGTGAAGACTTGGATATACTCCAACGTCAGTTGCAACAAAGGTTAACGGGAAATAAATGTTTGCTTGTTCTAGACGATGTCTGGAACAAAAATGGGGATATGTGGGAGCATTTACTACTTCCCTTTAAACGTGGATATTCACGAAGTAAGATCATCGTGACAACACATGACAAGGAAGTAGCATCAATCATGAGATCCACCCAGCTACTTCATTTAAAGCAATTGGAGGAGAATGACTGTTGGAGTTTATTTGTGAGCCTTGCTTTTAAAGGTAGGAATGTATTTGAATATCCAAATCTTGAATTGATAGGCAAGAAAATTGTAGAAAAGTGTGGGGGGTTGCCTTTAGCTCTAAAAACATTGGGGAATCTCTTGGGAAGAAAATTATCTGAACCTGAATGGGTTAAGATATTGGAAACTGATTTGTGGCATTTGTCGGAGGGTGGCAACAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAACTCTGTACTGAGATTGAGTTACCTTAACCTGTCTTCCAATCTGAAGCATTGTTTTGCTTATTGTTCTATTTTTCACAAGGGCTATGAGTTTGAGAAAGGTGAGCTAATCAAGCTTTGGATGGCTGAAGGTTTGCTGAAGTGTTGTGGAAAAGACAAAAGCGAAGAAGAGTTGGGCAATGAATTTTTCAATCATCTAGTGTCAATATCATTTTTCCAACAGTCAGTAGTTATGCCACTATGGGCTGGACGCGTCATGTTTGGTGCTGCCTTGATTTGA 4086 0.3744 MSRVVVAIGEWLNFECKKEEWWMGLIHGGGQLQGKSTLAWLVYSDHKMMEQVELKAWVHDSESYDLVHLTKSILRSFCSPPKSKDLETLQRQLQRLITGKKYLLVLDCVCSRDEEFLEKLLFPFNHGSSQGKIIVTTLDKEVVSIMRSTRLLDLKELEESDCWSLFVSRAFHDRITGQYPNLEIIGKKVVDKCGGSPLTMTEMGNLLRRKFSKCEWVKIMETDLRSLTDVGFNMIPILRMSYLNLSSNLKHCFAYCSIFPKGYEFEKGEQIKLWMAEGLLKCCGRDKSEEELGNEFFDDLVSISFFQRSVTMPSWAGKYYFIMHDLVNDLAKSVSGEFRLRLEGDNMQDIPKRTRHIWCCLDLEDGHRKLNQIHKIKGLHNLMEEAHGYGDQRFKITTDVQLNLFSRLKYLRMLSFNGCNLSEIADEISNLKLLRYLDLSYTEITSLTNSICMLYNLHTLLLEECFKLIELPSDFCKLVNLRHLNLKGTNIKKMPTKLRVLNNLEMLTNFVVGEQCGFDIKQLAELNYLQGRLQISGLKNVIDPAHAVAANLKDKKHLEELSMSYDEWREMDGSASKAHVYVLEALQPNRNLMRLTIKEYRGSSFPNWLGDRHLPNLVSLELLGCCDGIETIGTEFYGYNSSNVPFKSVETLRFEHLSEWKEWLCLEGFPLLQELCIKHCPKLKSDLPQHLPSLQKLEIIDCQELEASIPKADNISELELKRCDEILINELPSRVKKVILCGTRVIRSSLGKILFNSAFLEELEVEDFFGPNLEWPSLDFLSCNSLRTLTITGWHSPSLPFALHMLPNLNSLALYDSPWLESFFGRQLPSNLCSLRIERCARLMTSREERVENKLREPARFNIMVEAVGEAFLSSVFQVIRERLASRDFRDYFHERVGKKLEIILDSINQVLDDAETKQYQMQNVKKWLDDLKYEAYEVEQLLDAIAIDAQQKGKILRFFSVDESDIYGRENEKEEIIEFLLADNGSDNQVPIISLVGLMGMGKTTLAQLVYNDHRIKKQFDHIAWVHVSESFDLIRLTRSILDTFLSSVADFTFFGKKFSIADSEDLDILQRQLQQRLTGNKCLLVLDDVWNKNGDMWEHLLLPFKRGYSRSKIIVTTHDKEVASIMRSTQLLHLKQLEENDCWSLFVSLAFKGRNVFEYPNLELIGKKIVEKCGGLPLALKTLGNLLGRKLSEPEWVKILETDLWHLSEGGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSVLRLSYLNLSSNLKHCFAYCSIFHKGYEFEKGELIKLWMAEGLLKCCGKDKSEEELGNEFFNHLVSISFFQQSVVMPLWAGRVMFGAALI 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00371 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 955 1291 IPR027417 -
Tsu03g00371 1361 PANTHER DISEASE RESISTANCE PROTEIN RP 884 1344 IPR044974 GO:0006952
Tsu03g00371 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 256 IPR027417 -
Tsu03g00371 1361 Gene3D - 963 1135 IPR027417 -
Tsu03g00371 1361 Gene3D - 1138 1210 IPR042197 -
Tsu03g00371 1361 Gene3D - 156 241 IPR042197 -
Tsu03g00371 1361 PANTHER OS05G0414200 PROTEIN 34 765 - -
Tsu03g00371 1361 PANTHER OS05G0414200 PROTEIN 884 1344 - -
Tsu03g00371 1361 Pfam NB-ARC domain 7 221 IPR002182 GO:0043531
Tsu03g00371 1361 Pfam NB-ARC domain 970 1203 IPR002182 GO:0043531
Tsu03g00371 1361 Gene3D - 893 962 - -
Tsu03g00371 1361 PANTHER DISEASE RESISTANCE PROTEIN RP 34 765 IPR044974 GO:0006952
Tsu03g00371 1361 Gene3D - 5 152 IPR027417 -
Tsu03g00371 1361 PRINTS Disease resistance protein signature 1175 1189 - -
Tsu03g00371 1361 PRINTS Disease resistance protein signature 993 1008 - -
Tsu03g00371 1361 PRINTS Disease resistance protein signature 1078 1092 - -
Tsu03g00371 1361 Pfam Rx N-terminal domain 872 954 IPR041118 -
Tsu03g00371 1361 Gene3D - 242 334 IPR036388 -
Tsu03g00371 1361 Gene3D - 1272 1347 IPR036388 -
Tsu03g00371 1361 Gene3D Ribonuclease Inhibitor 392 739 IPR032675 -
Tsu03g00371 1361 SUPERFAMILY L domain-like 323 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00371 Tsu-Chr3 3148868 3155791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00371 994 1197 WRKY Transcription Factor Family AT5G45050 27.805 4.73e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00371 - - mtr:MTR_3g021170 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00371 03 3148868 3155791 Tsu03g00371 03 3148868 3155791 ECH